Gene RPC_4909 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_4909 
Symbol 
ID3973792 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp5479126 
End bp5479806 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content67% 
IMG OID637928022 
ProductErfK/YbiS/YcfS/YnhG 
Protein accessionYP_534750 
Protein GI90426380 
COG category[S] Function unknown 
COG ID[COG1376] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.774595 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGGTG TGACCGTTGC CCCGTCGATG TCCATCCGGT CGTTGTTCGC CCTCGCCGCT 
ATCGCCGTCA CGCTCGGCGG CTGCGTCACC CGGTCCGATG CCGAACTGAA TCTCGGCCCG
GCGAGGAGCA CGGTGGGTCC CGCGGTCGCG GCGCGCTATG CGGCGATCGA CAACGACAAA
TACCCGATCG CCGGCATCGA TCCGGACGAG CTGCAGCCGG CCTATGTGCG GCAATTGGTC
GACTACAAGA CCGACGAGCC GCCCGGGACC GTCGTGGTCG ATCCGCACGG TCGCTTTCTC
TACCTCGTGA TGGAGCGCGG CAAGGCGTTG CGCTACGGCG TCGGCGTCGG CAAGGCCGGG
CTGGAGTTCA GCGGCACCGC CCATGTCGGA CGCAAGGCCG TGTGGCCGCA TTGGACCCCG
ACGAAGAGCA TGATCGCACG CGAACCGCAG CGCTACGGCA AATGGGCCAA AGGCATGGAC
GGCGGCGGCG CCAATCCGCT CGGCCCGCGG GCGCTGTATC TGTTCAAGGA CGGCAAGGAC
ACGCTGTACC GGATCCACGG CACCACCGAA CCCGAAACGA TCGGCAAGGC GGTGTCGTCA
GGCTGCATCC GGATGCTGAA CCAGGATATC GTCGACCTCT ATTCACGCGT CCCGACAGGC
GCCAAGGTCG TCGTCCGCTA G
 
Protein sequence
MTGVTVAPSM SIRSLFALAA IAVTLGGCVT RSDAELNLGP ARSTVGPAVA ARYAAIDNDK 
YPIAGIDPDE LQPAYVRQLV DYKTDEPPGT VVVDPHGRFL YLVMERGKAL RYGVGVGKAG
LEFSGTAHVG RKAVWPHWTP TKSMIAREPQ RYGKWAKGMD GGGANPLGPR ALYLFKDGKD
TLYRIHGTTE PETIGKAVSS GCIRMLNQDI VDLYSRVPTG AKVVVR