| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4907 |
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| Symbol | |
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| ID | 3973790 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 5476662 |
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| End bp | 5478470 |
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| Gene Length | 1809 bp |
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| Protein Length | 602 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637928020 |
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| Product | cytochrome c biogenesis protein, transmembrane region |
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| Protein accession | YP_534748 |
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| Protein GI | 90426378 |
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| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4232] Thiol:disulfide interchange protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.955907 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGTCC GACTCTTCCG CATGCTCATC CTGCTCGTCG CGATCGTAGC GGGAGGCGCC
ACAGTGCACG CCGGTCCGGC CAGGACCGCA CCGTTCCAGC TCAACGCCCA GCACGGAGCC
GACGGCGTCG AACTGACCTG GCGCATCGCC GCGGGCGATT ATCTCTATCG CGACAAGATC
GCCGTCACCA CCGCCGAGGG CGGGCGCGTC GCGCTGCAGA CGCCGGCCGG CGAGGTCAAG
GACGATCCCA ATTTCGGCAT AACCGAGGTC TATCACCACA GCCTGACCGC GACGATCCCC
GCCGATGCCG TGAAGGGCGC GAGTCGGCTA ACGGTGAGCT ATCAGGGCTG CGCCGAGCGC
GGCATCTGCT ATCCGCCGGT GACGGCGCGC GTGGATCTCG GCACCTATCA GGTATCGATC
GCCGGCGGAG CGGCGCCGAG CGCGGACCCG GCCTGGCCCT CCGACGTGCC GGCGCTGCCG
GAACTCGCCG AGCCGGCAGC GACGTCGGCG TCCATGCCCG CTTCGGTGCT GCCGTCGATG
ACGCAAGGCT GGCTGCCGCT GCTGCTGGCG TTCGCCGGAT TCGGACTGCT GCTGGCGTTC
ACGCCCTGCG TGCTGCCGAT GGTGCCGATC GTCGCCGGCA TGCTGACGCG ATCCGGCCCT
GACCTTTCGC CGGTGCGCGG CTTCGCGCTG GCAGCGATCT ACACCCTGGC AATGGCCAGC
GCGTACGCCG CCCTCGGCGT GGCGGCGGCG TGGTCGGGAC AGAATCTGCA GAGCGCATTG
CAGGCGCCGC TGGCGCTCGC GGTGATGGCG TCGATCTATG TCGCGCTGGC GCTGTCGAGC
TTCGGCCTGT TCGAGCTGCA ACTCCCGGCC CGGTTCGGCG ACAATCTCGC CGGTCGCCTG
CATGGCCGCG CCGGGCCGTT ACTGGGCGCC GCCGCGCTCG GCTTCACCTC GGCGCTGATC
GTCGGGCCCT GCGTGACGCC ACCGCTCGCC GCAGCGCTGC TCTACGTCGC GCAGACCGGT
GATACGCTAC GCGGCGCGGC GGCGCTGTTC GCGCTCGGGC TCGGCATGGG ATTCCCGCTG
ATCCTGGTCG GCCTGTTCGG CGCGGGGGTG TTGCCGCGCT CCGGCCCCTG GCTGGTGACG
ATCCGCAAAC TGTTCGGCTT CGCCTTTCTC GGTCTCGCGG TCGCGTTGAT CTCGCGGGTG
CTGCCGGGGG CGGTGGCGTT GCTGCTGTGG TCCGGCCTTG CCATCGGCCT CGCCGCGTTT
CTCGGCGCGT TCGATCGGCT CGATCGGTCC GGCGGCGCGG TGAGACGCTT CGGCAAGGCC
GCTGGTCTCG CCGTGTTCGT CTATGGCGCG ACGCTGATCA TCGGCGCCGT CGGCGGCAGC
GAGGATCCGC TGCGTCCGCT CGCGGTGTTC GGCGCCGACC AGCCTGCGGC GACGGCGATC
TTCGCCCGTA CTGTGACGTC GATACCCGCG CTCGATCAGG CGATCGTCGA CGGCCGCGCG
CGCGGCAAGC CGATCATGAT CGACTTCTCT GCCGACTGGT GCACCTCGTG CAAGACCATG
GAGCGCGACG TGTTCGGCGA TCCCACGGTC CGGCGGCGGT TGAACGACGT CACGCTGATC
CGCGCCGACG TCACCCGGAG CAACGCGGAG ACCGCGGCGC TGATGAAGCG CTTCGACGTC
GTCGGACCGC CGACCGTGGT GTTTCTCGAT CAGCATGACG GCCACGAAAT CACATCCGCC
CGCACCGTCG GCGAAGTGCC CGCCGACAGC TTCGTCCAGA CCTTGCAGCG CATCGGCGCC
TCGTCCTGA
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| Protein sequence | MAVRLFRMLI LLVAIVAGGA TVHAGPARTA PFQLNAQHGA DGVELTWRIA AGDYLYRDKI
AVTTAEGGRV ALQTPAGEVK DDPNFGITEV YHHSLTATIP ADAVKGASRL TVSYQGCAER
GICYPPVTAR VDLGTYQVSI AGGAAPSADP AWPSDVPALP ELAEPAATSA SMPASVLPSM
TQGWLPLLLA FAGFGLLLAF TPCVLPMVPI VAGMLTRSGP DLSPVRGFAL AAIYTLAMAS
AYAALGVAAA WSGQNLQSAL QAPLALAVMA SIYVALALSS FGLFELQLPA RFGDNLAGRL
HGRAGPLLGA AALGFTSALI VGPCVTPPLA AALLYVAQTG DTLRGAAALF ALGLGMGFPL
ILVGLFGAGV LPRSGPWLVT IRKLFGFAFL GLAVALISRV LPGAVALLLW SGLAIGLAAF
LGAFDRLDRS GGAVRRFGKA AGLAVFVYGA TLIIGAVGGS EDPLRPLAVF GADQPAATAI
FARTVTSIPA LDQAIVDGRA RGKPIMIDFS ADWCTSCKTM ERDVFGDPTV RRRLNDVTLI
RADVTRSNAE TAALMKRFDV VGPPTVVFLD QHDGHEITSA RTVGEVPADS FVQTLQRIGA
SS
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