| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4906 |
|---|
| Symbol | |
|---|
| ID | 3973789 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | - |
|---|
| Start bp | 5475902 |
|---|
| End bp | 5476561 |
|---|
| Gene Length | 660 bp |
|---|
| Protein Length | 219 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637928019 |
|---|
| Product | two component transcriptional regulator |
|---|
| Protein accession | YP_534747 |
|---|
| Protein GI | 90426377 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.293577 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGAATCC TGGTGGTCGA AGACGATGCG ATGATCGCGG ACGGCATTCG CGCCGGCTTG
ACGCTGGCCG GTGCCAGCAT CGATTGCGTC GCGACCTGCG AGGATGCGGC GGCCGCGCTA
GCCGCGAACA ACTTCTCGGC CATCGTGCTC GACATCATGT TGCCCGACGG CAGCGGCATC
GATCTGCTGC GCAAGCTGCG CGCCGGCGGC GACACCACGC CGGTGCTGCT GCTGACCGCG
CTCGACGAGG TCGGCGACCG GATCTCGGGG CTCGATTCGG GCGCCGACGA TTATCTCGGT
AAGCCGTTCG ATCTCGACGA ACTCGGTGCC CGGTTGCGCG CGATCATCCG CCGCCGCGAT
GGCCGCGCCG CGACCTGCCT CGAACACGGC GCGATCCGGC TGTTTCCCGC CGACAACAAT
GCGACGCTGG ACGGCGCGCC GGTGCCGCTT TCGCGCCGCG AATTCGCGGT ACTGCATGCG
CTGATGGAGC GGCCCGGGGT GCTGCGCTCG CGCAGCGAAC TCGAAGAGCG TTTGTATGGT
TGGGGCGACG AGGTCGAAAG CAACGCCGTC GAAGTCCACG TCCACAACCT CCGCGCCAAG
CTCGGACGCG CCGCGATCGA GACCGTCCGC GGCATCGGCT ATCGGATGAG ACCGCTATGA
|
|---|
| Protein sequence | MRILVVEDDA MIADGIRAGL TLAGASIDCV ATCEDAAAAL AANNFSAIVL DIMLPDGSGI
DLLRKLRAGG DTTPVLLLTA LDEVGDRISG LDSGADDYLG KPFDLDELGA RLRAIIRRRD
GRAATCLEHG AIRLFPADNN ATLDGAPVPL SRREFAVLHA LMERPGVLRS RSELEERLYG
WGDEVESNAV EVHVHNLRAK LGRAAIETVR GIGYRMRPL
|
|---|
| |