Gene RPC_4880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_4880 
Symbol 
ID3973682 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp5448697 
End bp5449446 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content63% 
IMG OID637927992 
Productelectron transfer flavoprotein beta-subunit 
Protein accessionYP_534721 
Protein GI90426351 
COG category[C] Energy production and conversion 
COG ID[COG2086] Electron transfer flavoprotein, beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGTTC TGGTGCCGGT TAAGCGGGTC GTCGATTACA ACGTCAAGAT CCGGGTCAAG 
AGTGACGGGT CGGGCGTCGA ACTCGGCAAC GTCAAGATGT CGATGAATCC GTTTGACGAG
ATCGCGGTCG AGGAAGCCCT GCGCCTCAAG GAAGCCGGCA AGGCGACCGA GGTGGTGGTG
GTGTCGATCG GCCCGGCCCA GGCCTCGGAA ACCATCCGCA CTGGGCTGGC GATGGGCGCC
GACCGCGGCA TCCTGGTCAA GGTGGAAGGC AATGTCGAGC CGCTGGCGGT CGCCAAGATC
CTCAAGGCCA TCGCCGACGA GGAGAAGCCC GGCCTGATCA TTCTCGGCAA GCAGGCGATC
GACGACGATT CCAACCAGAC CGGCCAGATG CTGGCGGCGC TGCTCGGCTG GTCGCAAGCC
ACCTTCGCCT CCAAGCTCGA GGTCGACGGC GCCGACTTCC AGGTCGCCCG CGAGGTCGAT
GGCGGCTCGC AGATCGTCAA GCTGAAGGGC CCGGCGATCG TCACCACCGA CCTGCGGTTG
AACGAACCGC GCTATGCCAG TCTTCCGAAT ATCATGAAGG CGAAGAAAAA GCCGATCGCA
GAGGCAACCG CCGAGCAATA CGGCGTCGAT CTCGCCCCGC ATCTGGAGAT TCTGAAGACC
GTCGAACCCG GCGGCCGCAA GGCCGGCGTC AAGGTCAAGG ACGTCGCCGA GCTGGTCTCG
AAACTCAAGA ATGAAGCCGG GGTGATCTGA
 
Protein sequence
MKVLVPVKRV VDYNVKIRVK SDGSGVELGN VKMSMNPFDE IAVEEALRLK EAGKATEVVV 
VSIGPAQASE TIRTGLAMGA DRGILVKVEG NVEPLAVAKI LKAIADEEKP GLIILGKQAI
DDDSNQTGQM LAALLGWSQA TFASKLEVDG ADFQVAREVD GGSQIVKLKG PAIVTTDLRL
NEPRYASLPN IMKAKKKPIA EATAEQYGVD LAPHLEILKT VEPGGRKAGV KVKDVAELVS
KLKNEAGVI