| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4871 |
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| Symbol | |
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| ID | 3973673 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 5437679 |
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| End bp | 5439139 |
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| Gene Length | 1461 bp |
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| Protein Length | 486 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637927983 |
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| Product | pyridoxal-dependent decarboxylase |
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| Protein accession | YP_534712 |
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| Protein GI | 90426342 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0076] Glutamate decarboxylase and related PLP-dependent proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.16102 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCACGA CGCGGCGCGA GGCCGCGGAC GCGTTGGGCC ACAGCGAGAC GCTCGATCCG
CAAGACTGGG AGGAATTGCG CGCCCAGGGC CACCGCATGC TCGACGACAT GCTGGACTAT
ATCGCCAAGG TCCGCGAACG CCCGGTGTGG CGGCCGATCC CCGCGGCGGT GCGCGGGCAA
TTCCAGCAGG CGCTGCCGCG GGCGCCCTCC GACCTGAGCG ACGTCTATGG TGAGTTCAGC
GAGCTGATTG CGCCTTACGC CACCGGCAAT GTGCATCCAG GCTTCATGGG CTGGGTGCAT
GGCGGCGGCA CCCCGGTCGG GGTTTTGGCC GAGATGCTGG CGGCGGGGCT CAACGCCAAT
TGCGGCGGCC GCAACCACAT GCCGATCGAA GTGGAGCGCC AGATCGTGCG CTGGGTCCGG
CAGCTGTTCG GCTTTCCGGA GACCGCCAGC GGGGTGTTCG TCACCGGCAC CTCGATGGCC
AACCTGATGG CGGTGCTGGT GGCGCGCACC GCGACGCTCG GCACCGAGGT GCGGCAACGC
GGGCTCGGCG AGGCCGGGCT CACCGCCTAC ACCTCGGTCG CGGCCCACGG CTGCATCGCC
CAGGCGATGG ATCTCTCAGG TCTCGGCCGC GACGCGTTGC GCCGGATCGG CCAAGACGCC
GCCCACCGCA TCGACGTCAC GGCGTTGCGG GCGCGGATCG CCGAGGACCG CGCCGCCGGG
CGGGCGCCGT TCCTGGTGAT CGGCACCGCG GGCGCGGTCG ACACCGGCGC GATCGACGAC
CTCGATGCGC TGGCTGAGCT CTGCCGCGGC GAGAAGCTGT GGTTTCACAT CGACGGCGCG
TTCGGCGCAC TCGGCATGTT GTCGCCGCAG ATCGCGCCGC GGCTGAAGGG ACTTGAGCGC
GCGGATTCCA TCGCGTTCGA TTTCCACAAA TGGGGCCAGG TGCAATACGA CGCCGGCTTC
CTGATGGTGC GCGACGGCGA GCGGCATCGC GAGACCTTCG CGGCGCCGGT GGCCTATCTG
CGCCGCGAAA CCCGTGGCCT CGCCGCCGGC TCGCCCTGGC CGTGCGACTA CGGCCCGGAT
CTGTCGCGCG GCTTCCGTGC GCTGAAGACC TGGTTCACGC TGAAGACCTA CGGCACCGAC
AAGCTCGGCG CGATGATCGA ACGCACCTGC GCGCTGGCGA AGTATCTGGA GCGCAAGATC
GCCGCCGAGC CGCGGCTGGA ACTGCTGGCG CCGGTGGCGC TCAACATCGT CTGCTTCCGG
TTCCGCGGCG ACGATCCGAA CCACCTCAAC GCCGAGATCG TCGCCGACCT GCACGAATCC
GGCATCGTCG CGCCCTCGAC CACCACGATC CACGGCGCGC TGGCGATCAG GGCTGCGATC
GTCAACCACC GCACCGACGT GCAGGATGTC GATGCGCTGA TCGAGGCGGT GCTGCGGTTC
GGTGAGGCGC GGGTGAAGTA G
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| Protein sequence | MSTTRREAAD ALGHSETLDP QDWEELRAQG HRMLDDMLDY IAKVRERPVW RPIPAAVRGQ
FQQALPRAPS DLSDVYGEFS ELIAPYATGN VHPGFMGWVH GGGTPVGVLA EMLAAGLNAN
CGGRNHMPIE VERQIVRWVR QLFGFPETAS GVFVTGTSMA NLMAVLVART ATLGTEVRQR
GLGEAGLTAY TSVAAHGCIA QAMDLSGLGR DALRRIGQDA AHRIDVTALR ARIAEDRAAG
RAPFLVIGTA GAVDTGAIDD LDALAELCRG EKLWFHIDGA FGALGMLSPQ IAPRLKGLER
ADSIAFDFHK WGQVQYDAGF LMVRDGERHR ETFAAPVAYL RRETRGLAAG SPWPCDYGPD
LSRGFRALKT WFTLKTYGTD KLGAMIERTC ALAKYLERKI AAEPRLELLA PVALNIVCFR
FRGDDPNHLN AEIVADLHES GIVAPSTTTI HGALAIRAAI VNHRTDVQDV DALIEAVLRF
GEARVK
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