Gene RPC_4865 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_4865 
Symbol 
ID3973608 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp5430681 
End bp5431403 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content68% 
IMG OID637927977 
Producthypothetical protein 
Protein accessionYP_534706 
Protein GI90426336 
COG category[S] Function unknown 
COG ID[COG1434] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.765936 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.236297 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCAGC CGTCCGATCA GGATCCGCCG AACCTCGCAG CGGGCGCACC CCCCCGCTGC 
AGCGGGCTGC GCGCGGCGAT CGTGGCCACG CTGGCGATCG GCTTCGTCGG CATGGCGAGC
GGATTCGTCG TGTTTCTATC GCAACTGCGC GGCGCCGAAA TTCAGCCCGG CCGCAATGCC
GACGGCATCG TGGTGCTGAC CGGCGGCTCC TCGCGGGTGT CCGACGCGAT CGAATTGCTG
GCGGCGGGCT ACGGCCGGCG GCTGCTGATC TCCGGGGTGC ATCCGACCAA CGGCGCCAAC
GATATTTCGC GATCGCTGCC GGACAGCCAG CAGCTGCTCA GCTGCTGCGT CGATCTCGAC
CGCTCCGCGA TCAACACCCG CAGCAACGCC GCCGAAGCAC GGCGCTGGGC CCACGAACGC
GGTTTCCACT CGCTGATCGT GGTGACCTCG AATTACCACA TGCCGCGCGC GATCGTGGAA
ATGTCGCACG CCATGCCGGA TATCGAACTG ATCCCGTTCG CGGTGGTCGG CGACAAATGG
CGCGACGATC CGTGGTGGAC CAGTGGCGCC ACGTTCCGGC TGTTGTTATC GGAATATGCT
AAGTACATCG CCGCCGAGGC CCGGGTGCGG CTGGCCGGGT TCGGGGCCGA GCTTATGCCG
GACGGCGAGC CCGCGACCGA ATTGGTGGCC CGCCGCAAGC CGGCGACGGC TCTCGCCAAT
TGA
 
Protein sequence
MTQPSDQDPP NLAAGAPPRC SGLRAAIVAT LAIGFVGMAS GFVVFLSQLR GAEIQPGRNA 
DGIVVLTGGS SRVSDAIELL AAGYGRRLLI SGVHPTNGAN DISRSLPDSQ QLLSCCVDLD
RSAINTRSNA AEARRWAHER GFHSLIVVTS NYHMPRAIVE MSHAMPDIEL IPFAVVGDKW
RDDPWWTSGA TFRLLLSEYA KYIAAEARVR LAGFGAELMP DGEPATELVA RRKPATALAN