Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_4865 |
Symbol | |
ID | 3973608 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 5430681 |
End bp | 5431403 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637927977 |
Product | hypothetical protein |
Protein accession | YP_534706 |
Protein GI | 90426336 |
COG category | [S] Function unknown |
COG ID | [COG1434] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.765936 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.236297 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCAGC CGTCCGATCA GGATCCGCCG AACCTCGCAG CGGGCGCACC CCCCCGCTGC AGCGGGCTGC GCGCGGCGAT CGTGGCCACG CTGGCGATCG GCTTCGTCGG CATGGCGAGC GGATTCGTCG TGTTTCTATC GCAACTGCGC GGCGCCGAAA TTCAGCCCGG CCGCAATGCC GACGGCATCG TGGTGCTGAC CGGCGGCTCC TCGCGGGTGT CCGACGCGAT CGAATTGCTG GCGGCGGGCT ACGGCCGGCG GCTGCTGATC TCCGGGGTGC ATCCGACCAA CGGCGCCAAC GATATTTCGC GATCGCTGCC GGACAGCCAG CAGCTGCTCA GCTGCTGCGT CGATCTCGAC CGCTCCGCGA TCAACACCCG CAGCAACGCC GCCGAAGCAC GGCGCTGGGC CCACGAACGC GGTTTCCACT CGCTGATCGT GGTGACCTCG AATTACCACA TGCCGCGCGC GATCGTGGAA ATGTCGCACG CCATGCCGGA TATCGAACTG ATCCCGTTCG CGGTGGTCGG CGACAAATGG CGCGACGATC CGTGGTGGAC CAGTGGCGCC ACGTTCCGGC TGTTGTTATC GGAATATGCT AAGTACATCG CCGCCGAGGC CCGGGTGCGG CTGGCCGGGT TCGGGGCCGA GCTTATGCCG GACGGCGAGC CCGCGACCGA ATTGGTGGCC CGCCGCAAGC CGGCGACGGC TCTCGCCAAT TGA
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Protein sequence | MTQPSDQDPP NLAAGAPPRC SGLRAAIVAT LAIGFVGMAS GFVVFLSQLR GAEIQPGRNA DGIVVLTGGS SRVSDAIELL AAGYGRRLLI SGVHPTNGAN DISRSLPDSQ QLLSCCVDLD RSAINTRSNA AEARRWAHER GFHSLIVVTS NYHMPRAIVE MSHAMPDIEL IPFAVVGDKW RDDPWWTSGA TFRLLLSEYA KYIAAEARVR LAGFGAELMP DGEPATELVA RRKPATALAN
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