Gene RPC_4843 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_4843 
Symbol 
ID3973547 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp5405337 
End bp5406347 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content65% 
IMG OID637927955 
Productband 7 protein 
Protein accessionYP_534684 
Protein GI90426314 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0330] Membrane protease subunits, stomatin/prohibitin homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGACGT TCAGCGGCTT CGACGTGTTT TCGATCGCAC TGGTCGTGCT GGTCATTCTC 
ACTTTGTTCG CCGGGGTCAA GACCGTGCCG CAGGGCTTTG CCTGGACCGT CGAGCGGTTC
GGCAAGTTCA CCCGGACGCT GTCGCCGGGG CTCAACCTGA TCATTCCGTT CTTCGACCGG
GTCGGCCGCA AGGTGAATAT GATGGAGCAG GTGATCGCGA TCCCCGAGCA GGAGGTGATC
ACCAAGGACA ACGCCACCGT CACGGTGGAC GGCGTCGCGT TCTATCAGGT GTTCGACGCA
GCCAAGGCGA GCTACGAGGT CTCCGACCTC AACCAGGCGA TCATCGTCTT GACCATGACC
AACATCCGCT CGGTGATGGG CGCGATGGAT CTTGACCAGG TGCTGTCGCA TCGCGACGAG
ATCAACGAGC GGCTGCTGCG CGTGGTCGAC GCCGCGGTGT CGCCGTGGGG CCTCAAGGTC
AACCGCATCG AGATCAAGGA CATCGTGCCG CCGGCCGATC TGGTCGAGGC GATGGGCCGG
CAGATGAAGG CCGAACGGGT CAAGCGCGCG GATATTTTGC AAGCCGAGGG CCAACGGCAG
TCGGAAATTC TTCGTGCCGA AGGGGCAAAG CAAGGCCAGA TCCTGCAGGC CGAAGGCCGC
CGCGAAGCCG CGTTCCGCGA CGCCGAAGCC CGCGAGCGCT CCGCCGAGGC CGAGGCCAAA
GCAACCCAGA TGGTCTCCGA AGCCATTGCC AAGGGCGACG TCGCGGCGTT GAACTACTTC
ATCGCCGACA AGTACATCAA GGCGTTCGGG CAGTTGGCGG ATTCACCGAA TCAGAAGATC
ATCATGTTGC CGATCGAAGC GATGAGTATA CTCGGATCGC TGGCCGGCAT CGGCGAGATC
GCCAAGGCGA CGTTCGGCGA AGGCAGCGCA GCGGCGCAGG CCGCGGCGCG CCGCGGTTCG
GTGCCGCCGA GCGGCACGGC GGGGAGCGGC CCGGCGGCGC CGCCGCGCTG A
 
Protein sequence
MMTFSGFDVF SIALVVLVIL TLFAGVKTVP QGFAWTVERF GKFTRTLSPG LNLIIPFFDR 
VGRKVNMMEQ VIAIPEQEVI TKDNATVTVD GVAFYQVFDA AKASYEVSDL NQAIIVLTMT
NIRSVMGAMD LDQVLSHRDE INERLLRVVD AAVSPWGLKV NRIEIKDIVP PADLVEAMGR
QMKAERVKRA DILQAEGQRQ SEILRAEGAK QGQILQAEGR REAAFRDAEA RERSAEAEAK
ATQMVSEAIA KGDVAALNYF IADKYIKAFG QLADSPNQKI IMLPIEAMSI LGSLAGIGEI
AKATFGEGSA AAQAAARRGS VPPSGTAGSG PAAPPR