Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_4843 |
Symbol | |
ID | 3973547 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 5405337 |
End bp | 5406347 |
Gene Length | 1011 bp |
Protein Length | 336 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637927955 |
Product | band 7 protein |
Protein accession | YP_534684 |
Protein GI | 90426314 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGACGT TCAGCGGCTT CGACGTGTTT TCGATCGCAC TGGTCGTGCT GGTCATTCTC ACTTTGTTCG CCGGGGTCAA GACCGTGCCG CAGGGCTTTG CCTGGACCGT CGAGCGGTTC GGCAAGTTCA CCCGGACGCT GTCGCCGGGG CTCAACCTGA TCATTCCGTT CTTCGACCGG GTCGGCCGCA AGGTGAATAT GATGGAGCAG GTGATCGCGA TCCCCGAGCA GGAGGTGATC ACCAAGGACA ACGCCACCGT CACGGTGGAC GGCGTCGCGT TCTATCAGGT GTTCGACGCA GCCAAGGCGA GCTACGAGGT CTCCGACCTC AACCAGGCGA TCATCGTCTT GACCATGACC AACATCCGCT CGGTGATGGG CGCGATGGAT CTTGACCAGG TGCTGTCGCA TCGCGACGAG ATCAACGAGC GGCTGCTGCG CGTGGTCGAC GCCGCGGTGT CGCCGTGGGG CCTCAAGGTC AACCGCATCG AGATCAAGGA CATCGTGCCG CCGGCCGATC TGGTCGAGGC GATGGGCCGG CAGATGAAGG CCGAACGGGT CAAGCGCGCG GATATTTTGC AAGCCGAGGG CCAACGGCAG TCGGAAATTC TTCGTGCCGA AGGGGCAAAG CAAGGCCAGA TCCTGCAGGC CGAAGGCCGC CGCGAAGCCG CGTTCCGCGA CGCCGAAGCC CGCGAGCGCT CCGCCGAGGC CGAGGCCAAA GCAACCCAGA TGGTCTCCGA AGCCATTGCC AAGGGCGACG TCGCGGCGTT GAACTACTTC ATCGCCGACA AGTACATCAA GGCGTTCGGG CAGTTGGCGG ATTCACCGAA TCAGAAGATC ATCATGTTGC CGATCGAAGC GATGAGTATA CTCGGATCGC TGGCCGGCAT CGGCGAGATC GCCAAGGCGA CGTTCGGCGA AGGCAGCGCA GCGGCGCAGG CCGCGGCGCG CCGCGGTTCG GTGCCGCCGA GCGGCACGGC GGGGAGCGGC CCGGCGGCGC CGCCGCGCTG A
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Protein sequence | MMTFSGFDVF SIALVVLVIL TLFAGVKTVP QGFAWTVERF GKFTRTLSPG LNLIIPFFDR VGRKVNMMEQ VIAIPEQEVI TKDNATVTVD GVAFYQVFDA AKASYEVSDL NQAIIVLTMT NIRSVMGAMD LDQVLSHRDE INERLLRVVD AAVSPWGLKV NRIEIKDIVP PADLVEAMGR QMKAERVKRA DILQAEGQRQ SEILRAEGAK QGQILQAEGR REAAFRDAEA RERSAEAEAK ATQMVSEAIA KGDVAALNYF IADKYIKAFG QLADSPNQKI IMLPIEAMSI LGSLAGIGEI AKATFGEGSA AAQAAARRGS VPPSGTAGSG PAAPPR
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