Gene RPC_4830 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_4830 
Symbol 
ID3973534 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp5390720 
End bp5391604 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content65% 
IMG OID637927942 
Productperiplasmic solute binding protein 
Protein accessionYP_534671 
Protein GI90426301 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0803] ABC-type metal ion transport system, periplasmic component/surface adhesin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGACGCT TTTGGCAAAC CGCGAGTCTC GTCTTCACCG CCCTCACCGC GGCAATCCCC 
GCCGCTCATG CCCAGGACCG CATCGACGTG GTCGCCAGCT TCTCGATCCT GGCGGATTTC
GTCCGCAACG TCGGCGGCGA TCGGGTTCAG GTCGCCACCC TAGTGGGCCC CGGCGGCGAC
GCTCATGTTT ATACGCCGAC GCCCGCGGAT GCGAAGAAGA TCACCGCCGC CAAGCTGGTG
ATCATCAACG GCCTCGGCTT CGAGGGCTGG CTGCCGCGCC TGGTGAAATC GTCGGGCGGC
AAGGCGCAGG TCGCCACCGC CACCACTGGC ATCACACCGC GCAAGCTCGA AGGCCACGCC
GATCCGCACG CCTGGCAGTC GGTCCCGAAT GCTAAGATCT ACGTCGCCAA CATCCGCGAC
GCCTTGAGCG GCGCCGATCC CGCCGGCGCC GACACCTACC GCGCCAACGC CGAGAGCTAT
CTCGCCAAAC TCGACGCGCT GGACGGCGAG ATTCGCGCCG CGGTGGCGAA AATCCCGAGC
GAGCGGCGCA AGGTGATCTC CACCCACGAC GCCTTCGGCT ACTTCGCCGA GGCCTATGGC
ATCGCCTTCA TCGCCCCGCA GGGGGTCTCC ACCGAATCCG AGATCAGCGC CAAGGACATC
GCCCGCATCA TCAAACAGGT GAAGGCGGAA AAGCTGCCGG CGGTGTTCCT GGAGAGCATC
AGCGACCCGC GGCTGATGCG CCGGATCGCA GCCGAGACCG GCGCCAAGGT CGGCGGCTCG
CTGTATTCCG ACAGTCTGAC CGACGAAAAG GGCGAGGCCC CCACTTACAT TGATATGGTC
AGGTACAATA TAAAGACGCT GACGAGCGCG CTGACCACCG AGTAA
 
Protein sequence
MRRFWQTASL VFTALTAAIP AAHAQDRIDV VASFSILADF VRNVGGDRVQ VATLVGPGGD 
AHVYTPTPAD AKKITAAKLV IINGLGFEGW LPRLVKSSGG KAQVATATTG ITPRKLEGHA
DPHAWQSVPN AKIYVANIRD ALSGADPAGA DTYRANAESY LAKLDALDGE IRAAVAKIPS
ERRKVISTHD AFGYFAEAYG IAFIAPQGVS TESEISAKDI ARIIKQVKAE KLPAVFLESI
SDPRLMRRIA AETGAKVGGS LYSDSLTDEK GEAPTYIDMV RYNIKTLTSA LTTE