Gene RPC_4828 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_4828 
Symbol 
ID3973532 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp5389071 
End bp5389829 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content67% 
IMG OID637927940 
ProductABC transporter related 
Protein accessionYP_534669 
Protein GI90426299 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1121] ABC-type Mn/Zn transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGCGC AGCTCTCCTT TCATAACGTC ACGCTGGGTT ACGATCGTCA TCCGGCGGTG 
CACCACCTTG ACGGCGAAGT CGCGCCAGGC GCGCTGCTGG CGGTGGTCGG ACCGAACGGT
GCCGGCAAAT CGACGCTGTT TCGCGGCATC GTCGGCATTC TCAAGCCGCT CACCGGCTCG
ATCAATCTCG GCGGCCTCGA TGTCCGCGAT ATCGCTTATC TGCCGCAGAT TGCCGATATC
GACCGCAGCT TTCCGATCTC GGTATTCGAC TTCGTCGGCA CCGGACTGTG GCGACACACC
GGGATGTTCG GCGGTCTCGG CCGGCGCGAG CGCGATGTCA TCATTCATGC GCTGGCAACG
GTCGGCCTCA GCGGCTTCGA AAACCGCACC ATCGGCACGC TGTCGGGCGG CCAGATGCAG
CGCATCCTGT TTGCCCGTGT GCTGTTGCAG GATGCCCGCG TGATCGTGCT CGACGAGCCA
TTCAACGCCA TCGACGCCAA GACCTCGGCC GATCTCGTCG GCCTGGTGCG ACACTGGCAC
GATGAGCGGC GCACCGTATT GGCGGCGCTG CACGACATGG ACCTTGTGCA GGCGCATTTC
CCCGAGACCC TGCTGCTGGC GCGCGGCGCG GTGGCCTGGG GAGCGACCCC GCAGGTGCTG
ACGGCGGACA ATCTCGGCAA GGCGCGGCGG ATGTGCGAGG CGTTCGACGA CACCGCGGCG
CCCTGCGCCG ACGCGGCCCC GCATCCCGAG GCCGCCTGA
 
Protein sequence
MAAQLSFHNV TLGYDRHPAV HHLDGEVAPG ALLAVVGPNG AGKSTLFRGI VGILKPLTGS 
INLGGLDVRD IAYLPQIADI DRSFPISVFD FVGTGLWRHT GMFGGLGRRE RDVIIHALAT
VGLSGFENRT IGTLSGGQMQ RILFARVLLQ DARVIVLDEP FNAIDAKTSA DLVGLVRHWH
DERRTVLAAL HDMDLVQAHF PETLLLARGA VAWGATPQVL TADNLGKARR MCEAFDDTAA
PCADAAPHPE AA