| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4826 |
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| Symbol | |
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| ID | 3973530 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 5387818 |
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| End bp | 5388573 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637927938 |
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| Product | OmpA-like transmembrane region |
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| Protein accession | YP_534667 |
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| Protein GI | 90426297 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3637] Opacity protein and related surface antigens |
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| TIGRFAM ID | [TIGR03304] outer membrane insertion C-terminal signal |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.997688 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATTTCT GGGACGGAGC CAAGGACGGC TCCTCTGCAA GTGAAATTCT GGAGAAACAC
ACTATGAAGA AGTTCCTGCT TGGTACCGTG GCCCTCGTCG CCATGGCAAC GACGGTGCCG
GCACTTGCCG CCGACCTCGG CGCCCGCACC TACACCAAGG CCCCGGCCTA CGTCGCGGCC
CCGATCTACA ACTGGACCGG CTTCTACATC GGCGGTCACG TCGGCGGCGC CTTCGTTGGC
GACGACAGCA TCGGCACCGG CGCGACCCGC AGCAGCGACG GCACGTTCCT CGGCGGTGTG
CAGGGCGGCT ACGACTATCA GTTCGCCCCG AACTGGGTGC TCGGTGTTGA AGCTCAGTAC
AGCTGGCTCG ATCAGGGCAC CGATCCGGTT CTCGTCGGCC CCTACTCGTT CAGCGACAAG
CAGAAGGGCC TCGGCTCGGT CACCGGCCGC ATCGGCTACA CCTGGGGTCC GGCGCTGCTG
TACGCCAAGG GCGGTTATGC CTTCGCCGAC TACGACACCA CTGTCACCTT GGGTGGCGTT
GGTGCTGCTG TCTCCAGCAA GAGCGACGGT TACACCGTCG GTGCCGGCTT GGAATACCTG
TTCGCCCAGA ACTGGTCGGG CAAGGTCGAA TATCAGTACT ATGACTTCGG CAACGTCGAT
TTCGGCGGCT TCTCGTTCAA GAACGACGAG CACGTCGTCA AGGCCGGCCT GAACTACCGC
TTCAACTGGG GTGGCCCGGT CGTCGCCAAG TATTGA
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| Protein sequence | MHFWDGAKDG SSASEILEKH TMKKFLLGTV ALVAMATTVP ALAADLGART YTKAPAYVAA
PIYNWTGFYI GGHVGGAFVG DDSIGTGATR SSDGTFLGGV QGGYDYQFAP NWVLGVEAQY
SWLDQGTDPV LVGPYSFSDK QKGLGSVTGR IGYTWGPALL YAKGGYAFAD YDTTVTLGGV
GAAVSSKSDG YTVGAGLEYL FAQNWSGKVE YQYYDFGNVD FGGFSFKNDE HVVKAGLNYR
FNWGGPVVAK Y
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