Gene RPC_4817 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_4817 
Symbol 
ID3973521 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp5375856 
End bp5376227 
Gene Length372 bp 
Protein Length123 aa 
Translation table11 
GC content62% 
IMG OID637927929 
ProductFoF1 ATP synthase, subunit I 
Protein accessionYP_534658 
Protein GI90426288 
COG category[S] Function unknown 
COG ID[COG5336] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.340179 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.811608 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGACG ACACGGAGCG CGGCGGCAAA CACCACGATG GAAATCCCGA CGATCCGTCC 
TCCGATGAGG CTGCGCTTTC CGCAAGGCTC GGAAGTCTGG AACAACGGTT ATCCCAAACC
CGGGCGAGCC GAAAAATCCA GGCGGACCAA TCCGGAACAG GAAGTGAAAA CGCGCAAGCC
AGGGCCTCGG CCTTTGCGCG CGGCTTTCAG CTTTCCTCCG AACTGGTCGT GGGTGTTGTT
GTTGGGGCTG CGATCGGGTG GGGTTTCGAC CGCTTGTTGT CGACCTCGCC CTTCGGACTC
ATCGTGTTTT TCCTGCTCGG CTTCACCGCC GGCCTGATCA ACCTGATACG GTCCGCGGGG
CGCGGCTCCT GA
 
Protein sequence
MTDDTERGGK HHDGNPDDPS SDEAALSARL GSLEQRLSQT RASRKIQADQ SGTGSENAQA 
RASAFARGFQ LSSELVVGVV VGAAIGWGFD RLLSTSPFGL IVFFLLGFTA GLINLIRSAG
RGS