Gene RPC_4796 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_4796 
Symbol 
ID3973500 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp5356793 
End bp5358082 
Gene Length1290 bp 
Protein Length429 aa 
Translation table11 
GC content66% 
IMG OID637927908 
Productpeptidase M16-like 
Protein accessionYP_534637 
Protein GI90426267 
COG category[R] General function prediction only 
COG ID[COG0612] Predicted Zn-dependent peptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGTCG AGGTCACCAA GCTTCCCTCC GGATTGACGG TGGTCACCGA CACCATGCCG 
CATCTGCAGA CCGCGGCGCT GGGCGTTTGG ACCGGGGTCG GTGGCCGCGA TGAGAAGCCC
GACGAGCACG GCATCTCGCA TCTCCTCGAA CACATGGCGT TCAAGGGCAC CACCAAGCGC
TCCTCGCGCG AGATCGTCGA AGAGATCGAG GCGGTCGGCG GCGACCTCAA CGCCGGCACC
TCGACGGAGA CCACCGCCTA TTACGCCCGG GTGATGAAGG ACGACGTGCC GCTGGCGCTC
GACGTGTTGA GCGACATCCT CGCCAACCCC TCCTTCGTGC CGGACGAACT GGAGCGCGAA
AAGAGCGTGA TCGTGCAGGA AATCGGTGCG GCGCAGGACA CCCCGGACGA CGTGGTGTTC
GAGCATCTCA ACGAGCTGTG CTATCCGGAG CAGCCGATGG GCCGCTCGCT GCTCGGCACG
CCGCAGACCC TGAAGGGCTT CGATCGCGAC ACCCTGCAGG GCTACCTGTC GAAACATTAC
CGCGGCCCCG ACATGGTGGT GGCGGCCGCC GGCGCGGTCG ATCACCAGCA GATCGTCGAC
GAGGTGCAGA ACCGCTTCAA GAGCTTCGAC GCCGCACCGG CGCCGGCGCC ATTGCCGGCG
CTGTTCGGCC CGGGCGGCTC CAAGGTGGTG CACCGCGATC TCGAACAGGC GCATCTGACG
CTGGCGTTGG AAGGCCTGCC GCAGACCGAC CCGTCGCTGT TCAGCCTGCA GGTGTTCACC
AACGTGCTCG GCGGCGGAAT GTCGTCGCGG CTGTTCCAGG AGGTCCGCGA GAAGCGCGGG
CTGTGCTACT CGATCTACAC CTTCCACGCC CCCTATACCG ACACCGGCTT CTTCGGGCTC
TACACCGGCA CAGATCCGGC CGACGCGCCG GAGATGATGG AGGTGATCGT CGACGTCATC
AACGACGCGG TCGAGACCCT GACCGAAGCC GAAATTTCCC GTGCCAAGGC GCAGATGAAG
GCCGGGCTGT TGATGGCGCT GGAGAGCTGC AGCTCGCGCG CCGAGCAGCT GGCACGGCAT
ATGCTGGCCT ATGGTCGGCC GTTGCCGGTC GAGGAACTGG TGGCCAAGAT CGACGCCGTC
AGCGTCGAGT CGACCAGCAA GGCGGCGCGC GCGCTGCTGT CGCGCAGCCG GCCGGCGGTG
GTGGCGTTGG GGAGCGGTCG CGGGCTGGAC ACCGCGGTCG GTTTTGCCGA AGGTTTGACT
TTAGGGAAGG CCAAGCCGAG CTATCACTGA
 
Protein sequence
MSVEVTKLPS GLTVVTDTMP HLQTAALGVW TGVGGRDEKP DEHGISHLLE HMAFKGTTKR 
SSREIVEEIE AVGGDLNAGT STETTAYYAR VMKDDVPLAL DVLSDILANP SFVPDELERE
KSVIVQEIGA AQDTPDDVVF EHLNELCYPE QPMGRSLLGT PQTLKGFDRD TLQGYLSKHY
RGPDMVVAAA GAVDHQQIVD EVQNRFKSFD AAPAPAPLPA LFGPGGSKVV HRDLEQAHLT
LALEGLPQTD PSLFSLQVFT NVLGGGMSSR LFQEVREKRG LCYSIYTFHA PYTDTGFFGL
YTGTDPADAP EMMEVIVDVI NDAVETLTEA EISRAKAQMK AGLLMALESC SSRAEQLARH
MLAYGRPLPV EELVAKIDAV SVESTSKAAR ALLSRSRPAV VALGSGRGLD TAVGFAEGLT
LGKAKPSYH