Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_4796 |
Symbol | |
ID | 3973500 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 5356793 |
End bp | 5358082 |
Gene Length | 1290 bp |
Protein Length | 429 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637927908 |
Product | peptidase M16-like |
Protein accession | YP_534637 |
Protein GI | 90426267 |
COG category | [R] General function prediction only |
COG ID | [COG0612] Predicted Zn-dependent peptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGTCG AGGTCACCAA GCTTCCCTCC GGATTGACGG TGGTCACCGA CACCATGCCG CATCTGCAGA CCGCGGCGCT GGGCGTTTGG ACCGGGGTCG GTGGCCGCGA TGAGAAGCCC GACGAGCACG GCATCTCGCA TCTCCTCGAA CACATGGCGT TCAAGGGCAC CACCAAGCGC TCCTCGCGCG AGATCGTCGA AGAGATCGAG GCGGTCGGCG GCGACCTCAA CGCCGGCACC TCGACGGAGA CCACCGCCTA TTACGCCCGG GTGATGAAGG ACGACGTGCC GCTGGCGCTC GACGTGTTGA GCGACATCCT CGCCAACCCC TCCTTCGTGC CGGACGAACT GGAGCGCGAA AAGAGCGTGA TCGTGCAGGA AATCGGTGCG GCGCAGGACA CCCCGGACGA CGTGGTGTTC GAGCATCTCA ACGAGCTGTG CTATCCGGAG CAGCCGATGG GCCGCTCGCT GCTCGGCACG CCGCAGACCC TGAAGGGCTT CGATCGCGAC ACCCTGCAGG GCTACCTGTC GAAACATTAC CGCGGCCCCG ACATGGTGGT GGCGGCCGCC GGCGCGGTCG ATCACCAGCA GATCGTCGAC GAGGTGCAGA ACCGCTTCAA GAGCTTCGAC GCCGCACCGG CGCCGGCGCC ATTGCCGGCG CTGTTCGGCC CGGGCGGCTC CAAGGTGGTG CACCGCGATC TCGAACAGGC GCATCTGACG CTGGCGTTGG AAGGCCTGCC GCAGACCGAC CCGTCGCTGT TCAGCCTGCA GGTGTTCACC AACGTGCTCG GCGGCGGAAT GTCGTCGCGG CTGTTCCAGG AGGTCCGCGA GAAGCGCGGG CTGTGCTACT CGATCTACAC CTTCCACGCC CCCTATACCG ACACCGGCTT CTTCGGGCTC TACACCGGCA CAGATCCGGC CGACGCGCCG GAGATGATGG AGGTGATCGT CGACGTCATC AACGACGCGG TCGAGACCCT GACCGAAGCC GAAATTTCCC GTGCCAAGGC GCAGATGAAG GCCGGGCTGT TGATGGCGCT GGAGAGCTGC AGCTCGCGCG CCGAGCAGCT GGCACGGCAT ATGCTGGCCT ATGGTCGGCC GTTGCCGGTC GAGGAACTGG TGGCCAAGAT CGACGCCGTC AGCGTCGAGT CGACCAGCAA GGCGGCGCGC GCGCTGCTGT CGCGCAGCCG GCCGGCGGTG GTGGCGTTGG GGAGCGGTCG CGGGCTGGAC ACCGCGGTCG GTTTTGCCGA AGGTTTGACT TTAGGGAAGG CCAAGCCGAG CTATCACTGA
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Protein sequence | MSVEVTKLPS GLTVVTDTMP HLQTAALGVW TGVGGRDEKP DEHGISHLLE HMAFKGTTKR SSREIVEEIE AVGGDLNAGT STETTAYYAR VMKDDVPLAL DVLSDILANP SFVPDELERE KSVIVQEIGA AQDTPDDVVF EHLNELCYPE QPMGRSLLGT PQTLKGFDRD TLQGYLSKHY RGPDMVVAAA GAVDHQQIVD EVQNRFKSFD AAPAPAPLPA LFGPGGSKVV HRDLEQAHLT LALEGLPQTD PSLFSLQVFT NVLGGGMSSR LFQEVREKRG LCYSIYTFHA PYTDTGFFGL YTGTDPADAP EMMEVIVDVI NDAVETLTEA EISRAKAQMK AGLLMALESC SSRAEQLARH MLAYGRPLPV EELVAKIDAV SVESTSKAAR ALLSRSRPAV VALGSGRGLD TAVGFAEGLT LGKAKPSYH
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