| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4795 |
|---|
| Symbol | |
|---|
| ID | 3973499 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | + |
|---|
| Start bp | 5355366 |
|---|
| End bp | 5356796 |
|---|
| Gene Length | 1431 bp |
|---|
| Protein Length | 476 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637927907 |
|---|
| Product | threonine synthase |
|---|
| Protein accession | YP_534636 |
|---|
| Protein GI | 162136024 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0498] Threonine synthase |
|---|
| TIGRFAM ID | [TIGR00260] threonine synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.420552 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGAGGACG TGTTGACGCA GTATATTTCG ACGCGGGGCG AGGCCCCCAA GCTCGGCTTT
TGCGATGTCA TGCTGACCGG GCTCGCCCGC GACGGTGGGC TCTATGTGCC TGAGATCTGG
CCGCAATTGG CGCCCGACGC GATCGCGGGG TTTTTCGGCC GGCCGTATTG GGAGGTCGCC
GTCGAGGTGA TCCGCCCGTT CATCGGCGGC GAGATCTCCG ACGAAGATCT CGGCCGGATG
GCCAACGAGG CCTATGCCAC GTTCCGGCAT CCCGCGGTGG TGCCGCTGCG CCAGACCGCG
CCCAGCCAAT TCGTGCTGGA ATTGTTTCAC GGCTCGACGC TGGCGTTCAA GGATGTCGCG
ATGCAGCTAT TATCGCGGCT GATGGACCAC GTGCTGGCGA AGCGCCAACA GCGCATCACC
ATCGTGGTCG CGACCTCCGG CGACACCGGC GGCGCCGCGG TCGACGCCTT CGCCGGGCGC
GACAATGTCG ATCTGATCGT GCTGTTTCCG CACGGCCGGA TCTCCGACGT GCAACGCCGG
ATGATGACCA CGTCGGCGGC GAGTAACGTT CACGCGGTGG CGCTGCAAGG CAATTTCGAC
GATTGCCAGG CGATCGTGAA GGGGCTGTTC AACCACCACA AATTCCGCGA TCGCGTGGCG
CTGTCCGGCG TCAATTCGAT CAACTGGGCG CGGATCATCG CCCAGGTGGT GTACTACTTC
ACCAGCGCGG TGGCGCTCGG CGCGCCGGGG CGCGGCGTCG ATTTCACCGT GCCGACCGGC
AATTTCGGCG ACATCTTCGC CGGCTATGTC GCAAAGCGGA TGGGGCTGCC GATCCGCAAG
CTGAAGATCG CCGCCAACGT CAACGACATT TTGGCGCGCA CCCTGAAGAC CGGGATCCAC
GAGGTCCGCG AGGTCCACGC CACCGCGTCG CCGTCGATGG ACATCCAGGT GTCGTCGAAT
TTCGAGCGGC TGCTGTTCGA GGCCTCGGGC CGCGACGCCG CCTTGGTGCG CGGGTTGATG
GCCTCGCTGC AGCAATCCGG CCGCTACGTG CTGCCGGATC GCGTGCTGGC GGCGATCCGC
GAACAATTCG ACGCCGGCCG CGCCGACGAA GAGGAAACCG CAGCCGCGAT CCGCACCGCC
TGGCGCGAGG CCGGCGACCT GGTCGACCCG CACACCGCGG TGGCGTTGGC GGTGGCCGAC
CGCGACCAAA CCGATTCGAG CGTTCCCAAC ATCGTGCTGT CCACCGCCCA TGCGGCGAAA
TTCCCCGACG CGGTGGAAGC GGCCTGCGGC GTGCGTCCGG ACTTGCCGCT GTGGCTGGAG
GGTCTGATGA CGAGGCCCGA GCAGATCACC ACCCTGAAGC CCGATCAGGC GACGGTGGAA
AACTACGTGC TTGCGGTCAG CCGCGCCGCG AAACAAGGAG TTGCCGGATG A
|
|---|
| Protein sequence | MEDVLTQYIS TRGEAPKLGF CDVMLTGLAR DGGLYVPEIW PQLAPDAIAG FFGRPYWEVA
VEVIRPFIGG EISDEDLGRM ANEAYATFRH PAVVPLRQTA PSQFVLELFH GSTLAFKDVA
MQLLSRLMDH VLAKRQQRIT IVVATSGDTG GAAVDAFAGR DNVDLIVLFP HGRISDVQRR
MMTTSAASNV HAVALQGNFD DCQAIVKGLF NHHKFRDRVA LSGVNSINWA RIIAQVVYYF
TSAVALGAPG RGVDFTVPTG NFGDIFAGYV AKRMGLPIRK LKIAANVNDI LARTLKTGIH
EVREVHATAS PSMDIQVSSN FERLLFEASG RDAALVRGLM ASLQQSGRYV LPDRVLAAIR
EQFDAGRADE EETAAAIRTA WREAGDLVDP HTAVALAVAD RDQTDSSVPN IVLSTAHAAK
FPDAVEAACG VRPDLPLWLE GLMTRPEQIT TLKPDQATVE NYVLAVSRAA KQGVAG
|
|---|
| |