| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4794 |
|---|
| Symbol | |
|---|
| ID | 3973498 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | + |
|---|
| Start bp | 5354267 |
|---|
| End bp | 5355046 |
|---|
| Gene Length | 780 bp |
|---|
| Protein Length | 259 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 637927906 |
|---|
| Product | Surfeit locus 1 |
|---|
| Protein accession | YP_534635 |
|---|
| Protein GI | 90426265 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3346] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAATG TCTTCCCGCG GAGCCGCGGC CGGCTCGGCC TCGGCGTGAT CGCAGCTCTG
ATGGTGGCGG TGTTGCTGTC GCTCGGGGTC TGGCAATTGC AGCGCCGGGT GCAGAAACAC
GCGCTGATCG CCGCATTGAC CGAGCGGCTG GCGGCGCCGC CCGGCGAGTT GCCGCGGGCT
GTCGAGTGGC CGAAGCTCAC TCCGGCGCAG GACGAATTCC GCCGTGTCGC TTTCACCGCG
AGCTACGCCA ACCAGCCCGA CGCGATGGTG TATTCCTCCG GCTCGGCGAT CCGCGACGAC
ATCGCCGGCC CCGGCACCTG GGCGATGCTG CCGGCGCGGC TGCCGGGCGG GCAGACCCTC
ATAATCAATG CCGGCTTCGT TCCCAACACC ATGCAGGACC GCGCCCAGCA GGACCGCGCG
GTGGCGTCGC TGCGCAGCGG CGAGCCGGTG GCGCTGACCG GCTATCTGCG GTTGCCCGAA
GCCGGCGGCG CGCTGACGCC GGCGCCCGAC GTGGCCAAGC GGCTGTGGTT CGCTCGCGAC
ACCGCCGCGA TGGCGGCGGC GCTCGGCTGG GGCGAGGTGG CGCCGTTCTA CATCGACTTG
GAGACGCCGG TACCCGCCTC CGGCGTGCCC AAGCCTGGCC CGCTCGGCGT GCATCTGAAG
GACGACCACC TGCAATACGC CATCACCTGG TTCGGCCTGG CCGGCGCGGT GGCGATCGCC
TTCGCGGTCT GGCTCAATGG GCAGCGGCGG CGGCGCAGCG GCGATGATAT CGCCCGCTGA
|
|---|
| Protein sequence | MSNVFPRSRG RLGLGVIAAL MVAVLLSLGV WQLQRRVQKH ALIAALTERL AAPPGELPRA
VEWPKLTPAQ DEFRRVAFTA SYANQPDAMV YSSGSAIRDD IAGPGTWAML PARLPGGQTL
IINAGFVPNT MQDRAQQDRA VASLRSGEPV ALTGYLRLPE AGGALTPAPD VAKRLWFARD
TAAMAAALGW GEVAPFYIDL ETPVPASGVP KPGPLGVHLK DDHLQYAITW FGLAGAVAIA
FAVWLNGQRR RRSGDDIAR
|
|---|
| |