Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_4792 |
Symbol | |
ID | 3972995 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 5352814 |
End bp | 5353671 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637927904 |
Product | cytochrome c oxidase, subunit III |
Protein accession | YP_534633 |
Protein GI | 90426263 |
COG category | [C] Energy production and conversion |
COG ID | [COG1845] Heme/copper-type cytochrome/quinol oxidase, subunit 3 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCACGG CGCACGCCAA GCACCACGAC TATCATCTCG TCGATCCGAG CCCCTGGCCG GTGGTGGGCT CGCTGTCCGC TTTTGTCATG GCGGTCGGCG CCGTCACCTG GATGCACCAC ATGTTCGCTG GCGCGCCGTT CCTGTTCGGC GCCGGCACCA TCGGCGTGCT CTACACCATG GCGGCGTGGT GGGGCGACGT GATCCGCGAG GCGCAGGTCA AAGGCGATCA CACCCGGGTC GTGCAGATCA GCCACCGCTA CGGCATGATC CTGTTCATCG CCTCCGAGGT GATGTTCTTC GTCGCCTGGT TCTGGGCGTA TTTCAATTCG GCATTGTTTC CCGGCGATCC GGTCCACGCC GCCCGCGAGG CGCTGTTCGG CGGGGTGTGG CCGCCGAAGG GCATCGAAAC CTTCGATCCC TGGCACCTGC CGCTGCTCAA TACGCTGATC CTGTTGACCT CGGGCACCAC GGTGACCTGG GCGCATCACG CGCTGTTGCA GAACGACCGC AAGGGGCTGA AATGGGGACT GATCCTCACC ATCGCGCTCG GCATCACCTT CAGCTGCGTG CAGGCCTATG AATACAGCCA TGCCGCGTTC TCCTTCGCCG ACAACATCTA CGGCGCCACC TTCTTCATGG CCACCGGCTT CCACGGCTTT CACGTGCTGG TCGGCACCAT CTTCCTCACC GTCTGCCTGA TGCGCGCCTA TGCCGGGCAC TTCACCCCGA CCCAGCACCT TGGCTTCGAA TTCGCCGCCT GGTACTGGCA TTTCGTCGAC GTGGTCTGGC TGTTCCTGTT CATCAGCATC TATGTCTGGG GCCACGGCGC CTCGACCATG GCGCACGGCG CGCATTGA
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Protein sequence | MATAHAKHHD YHLVDPSPWP VVGSLSAFVM AVGAVTWMHH MFAGAPFLFG AGTIGVLYTM AAWWGDVIRE AQVKGDHTRV VQISHRYGMI LFIASEVMFF VAWFWAYFNS ALFPGDPVHA AREALFGGVW PPKGIETFDP WHLPLLNTLI LLTSGTTVTW AHHALLQNDR KGLKWGLILT IALGITFSCV QAYEYSHAAF SFADNIYGAT FFMATGFHGF HVLVGTIFLT VCLMRAYAGH FTPTQHLGFE FAAWYWHFVD VVWLFLFISI YVWGHGASTM AHGAH
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