Gene RPC_4792 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_4792 
Symbol 
ID3972995 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp5352814 
End bp5353671 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content64% 
IMG OID637927904 
Productcytochrome c oxidase, subunit III 
Protein accessionYP_534633 
Protein GI90426263 
COG category[C] Energy production and conversion 
COG ID[COG1845] Heme/copper-type cytochrome/quinol oxidase, subunit 3 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCACGG CGCACGCCAA GCACCACGAC TATCATCTCG TCGATCCGAG CCCCTGGCCG 
GTGGTGGGCT CGCTGTCCGC TTTTGTCATG GCGGTCGGCG CCGTCACCTG GATGCACCAC
ATGTTCGCTG GCGCGCCGTT CCTGTTCGGC GCCGGCACCA TCGGCGTGCT CTACACCATG
GCGGCGTGGT GGGGCGACGT GATCCGCGAG GCGCAGGTCA AAGGCGATCA CACCCGGGTC
GTGCAGATCA GCCACCGCTA CGGCATGATC CTGTTCATCG CCTCCGAGGT GATGTTCTTC
GTCGCCTGGT TCTGGGCGTA TTTCAATTCG GCATTGTTTC CCGGCGATCC GGTCCACGCC
GCCCGCGAGG CGCTGTTCGG CGGGGTGTGG CCGCCGAAGG GCATCGAAAC CTTCGATCCC
TGGCACCTGC CGCTGCTCAA TACGCTGATC CTGTTGACCT CGGGCACCAC GGTGACCTGG
GCGCATCACG CGCTGTTGCA GAACGACCGC AAGGGGCTGA AATGGGGACT GATCCTCACC
ATCGCGCTCG GCATCACCTT CAGCTGCGTG CAGGCCTATG AATACAGCCA TGCCGCGTTC
TCCTTCGCCG ACAACATCTA CGGCGCCACC TTCTTCATGG CCACCGGCTT CCACGGCTTT
CACGTGCTGG TCGGCACCAT CTTCCTCACC GTCTGCCTGA TGCGCGCCTA TGCCGGGCAC
TTCACCCCGA CCCAGCACCT TGGCTTCGAA TTCGCCGCCT GGTACTGGCA TTTCGTCGAC
GTGGTCTGGC TGTTCCTGTT CATCAGCATC TATGTCTGGG GCCACGGCGC CTCGACCATG
GCGCACGGCG CGCATTGA
 
Protein sequence
MATAHAKHHD YHLVDPSPWP VVGSLSAFVM AVGAVTWMHH MFAGAPFLFG AGTIGVLYTM 
AAWWGDVIRE AQVKGDHTRV VQISHRYGMI LFIASEVMFF VAWFWAYFNS ALFPGDPVHA
AREALFGGVW PPKGIETFDP WHLPLLNTLI LLTSGTTVTW AHHALLQNDR KGLKWGLILT
IALGITFSCV QAYEYSHAAF SFADNIYGAT FFMATGFHGF HVLVGTIFLT VCLMRAYAGH
FTPTQHLGFE FAAWYWHFVD VVWLFLFISI YVWGHGASTM AHGAH