| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4789 |
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| Symbol | |
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| ID | 3972992 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 5350884 |
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| End bp | 5351825 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637927901 |
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| Product | protoheme IX farnesyltransferase |
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| Protein accession | YP_534630 |
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| Protein GI | 90426260 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0109] Polyprenyltransferase (cytochrome oxidase assembly factor) |
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| TIGRFAM ID | [TIGR01473] protoheme IX farnesyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTCGGTTG TTGAAAGCCA CGACATCGAG TTCGCCGCGC CGCGGATCTC CGAGGCGAGC
GTTGCCGATT ACATCGCGCT GTTGAAGCCG CGGGTGATGT CGCTGGTGAT CTTCACCGCT
TTGGTCGGGC TGTTGCTGGC GCCCGGCTAT ATCCATCCGG TGCTGGCATT CACGTCCATC
CTGTGCATCG CGGTCGGCGC GGGCGCCTCC GGGGCGCTGA ACATGTGGTA CGAGGACGAC
ATCGACGCCA AGATGACCCG TACCGCCAAC CGGCCGATCC CCCGCGGCCG GGTCAGCAAG
CCTGAGGCGC TGACCTTCGG CCTGGTGCTT TCGTTCTTCT CGGTGGTGAC GCTCGGCATT
CTGGTGAACT GGTTCGCCGC CGCCCTGCTG GCTTTCACCA TCTTCTTCTA CGTCGTGATC
TACACCATCT GGCTGAAGCG CTGGACCGCG CAGAACATCG TGATCGGCGG CGCCGCCGGC
GCGCTGCCGC CGGTGGTGGC GTGGGCCGCG GCCGCGGGCT CGCTGTCGGT CGAGCCGATG
CTGTTGTTCG CCATCATCTT CTTCTGGACG CCACCGCATT TCTGGGCGTT GGCGCTGTTC
CGCGCCGGCG ACTACGCCAA TGCCGGGGTG CCGATGCTGC CGGTGACCGC CGGACCCGAC
GCCACAAGGC TCTCGATCCT GCTCTACACC ATCGTGCTTG TCGCTGTGGC TTTCGCGCCG
TGGCCGCTGG GCTATTTCGA CGCGATCTAC GGCATCACCT CGCTGGCGCT GGGCGGCTGG
ATGCTGCTGC TGACGCTGCG GGTGTATCGG CTGCGCCACG GCAGCGCCGC GTTGCGCGCC
AGCCGCAGCC TGTTCAAGTT CTCGATTCTC TACCTGTTCG CGCTGTTCGC GGTGCTGCTG
CTCGAGGTCA TCGTCCGCGG CGTGATCGGC GCGTTGGCGT GA
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| Protein sequence | MSVVESHDIE FAAPRISEAS VADYIALLKP RVMSLVIFTA LVGLLLAPGY IHPVLAFTSI
LCIAVGAGAS GALNMWYEDD IDAKMTRTAN RPIPRGRVSK PEALTFGLVL SFFSVVTLGI
LVNWFAAALL AFTIFFYVVI YTIWLKRWTA QNIVIGGAAG ALPPVVAWAA AAGSLSVEPM
LLFAIIFFWT PPHFWALALF RAGDYANAGV PMLPVTAGPD ATRLSILLYT IVLVAVAFAP
WPLGYFDAIY GITSLALGGW MLLLTLRVYR LRHGSAALRA SRSLFKFSIL YLFALFAVLL
LEVIVRGVIG ALA
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