| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4785 |
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| Symbol | |
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| ID | 3972988 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 5345539 |
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| End bp | 5346963 |
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| Gene Length | 1425 bp |
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| Protein Length | 474 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637927897 |
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| Product | peptidase U62, modulator of DNA gyrase |
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| Protein accession | YP_534626 |
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| Protein GI | 90426256 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0312] Predicted Zn-dependent proteases and their inactivated homologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.472355 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCAAT CCGCCACCAC CTCGCTCCTC GACCGCGCCA AGCTCGACCG CGACGCCGTG
CGCGGGGAAA TCGCCCGCGG CTTGCAGGGC GCCGACGATG GCGAGCTGTT CCTGGAATAT
CGCCAGTCCG AAGCCCTGAT GTTCGACAAT GGCCGGCTGA AGCAGGCCAC CTACGACACC
GCACAGGGCT TCGGCCTGCG CGCCGTGAAG GACGACGCGG TGGGCTACGC GCATTCCTCC
GACATGTCGC TGAAGGCGTT GATTCGCGCC GCCGACGCGG TGGCGGCGGT GCGCGGCGGC
TACAGCGGCA ACCTGGCCGC GGCGCCGGCG CACAGCAATG TGCGGCTCTA TGGCGACGAC
AATCCGCTGG AAGCCCCGGG CTTCGAGGCC AAGGTCAAGC TGCTCGCCGA GATCGACGCT
TACGTTCGCG AAAAGGATCC GCGGGTGCGG CAGGTTTCGG TGTCGCTCGG CGCCACCTGG
CAGGTGGTGG AGATCCTGCG CCCCGACGGC GAGAGCTATC GCGACATCCG CCCCTTGGTG
CGGGTCAACG TTTCCGTCGT CGCAGGCCAG GGCGACCGGC AGGAAAGCGG CAGCAAGGGC
TATGGCGGCC GCGAAGGCTA TGCCCGCTTC ATCGACAGCA AGGCCTGGCG CGACGCCGCC
GACGGCGCGA TCCGCGAAGC GCTTGTCAAT CTGGACTCGG TGCCGGCTCC GGCCGGCGAG
ATGGACGTGG TGCTCGGCCC CGGCTGGCCC GGCGTGATGC TGCACGAGGC GGTCGGCCAT
GGGCTCGAGG GCGATTTCAA CCGCAAGCAG ACCTCGGCCT TCGCGGGCCT GATGGGCCAG
CAGGTCGCGG CGAAGGGCGT CACCGTGGTC GATGACGGCA CCATTGCTGC AAGACGCGGC
TCGCTGTCGA TCGACGATGA GGGCACGCCG ACCAGCCGCA CCGTGCTGAT CGAGGACGGC
ATTCTGGTCG GCTACATGCA GGACCGCCAG AACGCCCGGC TGATGAACAT GCAGCCTACC
GGCAACGGCC GCCGCGAAAG CTACGCGCAT CTGCCGATGC CGCGGATGAC CAACACCTAC
ATGACCGAAG GTGCGCGCGA TCCCGCGGAA ATCCTCGCCT CGGTGAAGAA CGGCATCTTT
GCTGCGAATT TCGGCGGCGG CCAGGTCGAT ATCACCTCCG GCAAATACGT CTTCCAATGC
ACCGAGGCCT ATCGCATCGA GAACGGCAAG CTCGGCGCGC CCTTGAAGGG CGCGATGCTG
ATCGGCAACG GCCCGACCGA CCTGCATCGC ATCTCGATGA TCGGCAACGA CGTGCAGCTC
GATTCGGGCA TCGGCACTTG CGGCAAGAAC GGTCAGGGCG TGCCGGTCGG CGTCGGCCAG
CCGACGCTGC GGATGGACCG CATCACCGTC GGCGGCACCG GTTAG
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| Protein sequence | MTQSATTSLL DRAKLDRDAV RGEIARGLQG ADDGELFLEY RQSEALMFDN GRLKQATYDT
AQGFGLRAVK DDAVGYAHSS DMSLKALIRA ADAVAAVRGG YSGNLAAAPA HSNVRLYGDD
NPLEAPGFEA KVKLLAEIDA YVREKDPRVR QVSVSLGATW QVVEILRPDG ESYRDIRPLV
RVNVSVVAGQ GDRQESGSKG YGGREGYARF IDSKAWRDAA DGAIREALVN LDSVPAPAGE
MDVVLGPGWP GVMLHEAVGH GLEGDFNRKQ TSAFAGLMGQ QVAAKGVTVV DDGTIAARRG
SLSIDDEGTP TSRTVLIEDG ILVGYMQDRQ NARLMNMQPT GNGRRESYAH LPMPRMTNTY
MTEGARDPAE ILASVKNGIF AANFGGGQVD ITSGKYVFQC TEAYRIENGK LGAPLKGAML
IGNGPTDLHR ISMIGNDVQL DSGIGTCGKN GQGVPVGVGQ PTLRMDRITV GGTG
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