| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4781 |
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| Symbol | |
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| ID | 3972984 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 5341163 |
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| End bp | 5342689 |
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| Gene Length | 1527 bp |
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| Protein Length | 508 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637927893 |
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| Product | carboxylyase-like protein |
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| Protein accession | YP_534622 |
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| Protein GI | 90426252 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0043] 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases |
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| TIGRFAM ID | [TIGR00148] UbiD family decarboxylases |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.588855 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGAACC GCGTTAAACC GCCCTTCCCG GACTTGCGCG CGTTCATGGC GTATCTTGAG
TCCCGCGGTC AATTGGTCAG AATCCGCAGA CCGGTGTCTG TGGTGCACGA TCTCACCGAA
ATCCACCGCC GTGTGTTGGC CGACAACGGC CCGGCGCTGT TGATCGAGAA CCCGATCAAG
GCGGACGGCA CGCCGTCCGA AATGCCGATC CTGGTGAATC TGTTCGGCAC CGTGGAGCGG
GTGGCCTGCG GGTTCGGCAT TACGCCGGAC AAATTGGGCG ACCTCGGCGA GACGCTGGCT
GAAATGCGCG CGCCGGTGCC GCCGCAGAGC CTGTCCGACG CGCTCAGCAA ATTGCCGATG
GCCCGCGCCG CCCTGGCGAT GCGGCCGAAG ACTGCGAAAT CCGCATCGGC GCAGAGCGTG
GTGTGGAGCG GCGCCGACGT CGATCTCGGC CGCCTCCCGG TGCAGATCCC GTGGCCGAAC
GAGCCCGCGC CCTTGATCAC CTGGGGGCTG GTGTTCACCA AACCGCCGGA GCACAGCGGC
GGCGCCGACA ATGTCGGGGT CTATCGCATG CAGGTGCTCG GCCGCGACCG CCTGATCATG
CGCTGGCTGG CGCATCGCGG CGGCGCCAAG CACCACCACC AGTGGCAGAA GCAGGGCCGC
GACATGCCGG TGGCGATCGT GATCGGCGCC GATCCGGCGA TGATCCTCTC CGCCGTGCTG
CCGCTGCCGG AAGATCTTTC CGAAATCAAA TTCTCCGGGC TGTTGCGCGG CGAGCGGCCG
GTGCTGGTGC CTTGCGTCAG CGTGCCGCTG CAAGTGCCGG CGGACGCCGA GATCGTCATC
GAGGGCATCG TCTCGGCCAC CGAGACCGCG CCGGAGGGGC CGTACGGCGA CCACACCGGC
TATTACAATT CGGTCGAGCA GTTTCCGGTG CTGACCGTCA CCGCGATCAC CACGCGTAAA
GATCCGATTT ATCTGTCGAC CTATACCGGG CGGCCGCCGG ACGAGCCGTC ACGGCTTGGC
GAGGCGTTCA ACGACATCTT CCTGCCGGTG GCGAAGCGGC AGTTTCCCGA AATCGTCGAC
CTCTGGCTGC CGCCGGAGGC CTGCTCGTAC CGGATCGCGG TGGCGTCGAT CAAGAAACGC
TACCCCGGCC AGGCGCGTCG GCTGATGATG GGGCTGTGGT CGATGCTGCC GCAGTTCAGC
TATACCAAAT TGCTGATCAT CGTCGACGAC GACATCGACG TGCGCGACTG GGCCGACGTG
ATGTGGGCGG TCTCCACCCG CTGCGACACC TCGCGCGACA TGGTGTCGAT CTCCGACACC
CCGATCGATT ATCTGGATTT CGCCTCGCCA AAGTCAGGCC TCGGCGGCAA ATTGGGCATC
GACGCCACCA ACAAGATCGG CGCCGAGACG CAGCGCGAAT GGGGCGAGGT GCTGACCATG
GATCCCGCCG TGTTGCAGCG GGTCGATGCG ATGTGGTCGT CGCTCGGGCT GGGACCGGCG
CTGCCGCAAC GTAAGATGGT GCGATGA
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| Protein sequence | MLNRVKPPFP DLRAFMAYLE SRGQLVRIRR PVSVVHDLTE IHRRVLADNG PALLIENPIK
ADGTPSEMPI LVNLFGTVER VACGFGITPD KLGDLGETLA EMRAPVPPQS LSDALSKLPM
ARAALAMRPK TAKSASAQSV VWSGADVDLG RLPVQIPWPN EPAPLITWGL VFTKPPEHSG
GADNVGVYRM QVLGRDRLIM RWLAHRGGAK HHHQWQKQGR DMPVAIVIGA DPAMILSAVL
PLPEDLSEIK FSGLLRGERP VLVPCVSVPL QVPADAEIVI EGIVSATETA PEGPYGDHTG
YYNSVEQFPV LTVTAITTRK DPIYLSTYTG RPPDEPSRLG EAFNDIFLPV AKRQFPEIVD
LWLPPEACSY RIAVASIKKR YPGQARRLMM GLWSMLPQFS YTKLLIIVDD DIDVRDWADV
MWAVSTRCDT SRDMVSISDT PIDYLDFASP KSGLGGKLGI DATNKIGAET QREWGEVLTM
DPAVLQRVDA MWSSLGLGPA LPQRKMVR
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