| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4778 |
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| Symbol | |
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| ID | 3972981 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 5338502 |
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| End bp | 5339422 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637927890 |
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| Product | peptidase U32 |
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| Protein accession | YP_534619 |
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| Protein GI | 90426249 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0826] Collagenase and related proteases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCTCA CACTTGGACC GGTGCTTTAC AACTGGAAGC CCGAGGCGTG GCGCGACTTC
TATTTCCGGA TCGCCGAGGA AGCCCCGATC GACACCGTGG TGGTCGGCGA GATCGTCTGC
TCGAAGCGCT CGCCGTTCAT CGCCGAGCAC ATTCCGGCGG TGGTGGAGCG GCTGTCGGCC
TGCGGCAAGG ACGTGGTGAT GGGGTCGCTG ACGCTGATGT CGCTGACCCG CGAGCGCAAC
GCGATGGCCG AACTCGCCGC AGCACCGGAA CTGACCATGG AGGTCAACGA CCTGTCTTGC
CTCGGCATGC TTGGTGATCG GCCGCACGCC ATCGGGCCGT TCGTCAACAT CTACAACGAG
GCCACCGCGA AGTATTTCGC CTCGCACGGC GCCAAGCGGA TCTGTCTGCC GCCGGAATTG
CCACTGACCG CGATCCGCAC CATCGCCGCG GCGTTGCCCG ACGTCATCTT CGAGGTGTTC
GGCTTCGGCC GCGCGCCGCT GGCGATTTCG GCGCGCTGCT ATCACGCGCG GCTCAACAAG
CTGTCGAAGG ACAATTGCAA GTTCGTCTGC GAACAGGATC CGGACGGGCT GGCGGTGTTC
ACGCTCGACA ACGAGCCGTT CCTGGCGATG AACGGCGTGC AGACGCTGTC CTATGCCTGC
ACCAGCGTGC TCGGCGAAAT CGACGATCTC ACCGAGGCCG GGGTGCGCTC GCTGCGGCTG
TCGCCGCAGC AATGCGACAT GGTCGAGGTG GCCAAGGTGT ATCGCGACGT GATCGACGGC
AAGCGCAGCG TCGCCGAAGG CGCCGCGGCA CTGACGACCA TCTATCCGGT TCCGGTCGCC
AATGGTTTTC TCTATGCCAA GCCCGGTTCG ACGTTCATCA CCAACGTCAC CGAGGCGCAA
CGGACTGCCA GGGCGCTCTG A
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| Protein sequence | MKLTLGPVLY NWKPEAWRDF YFRIAEEAPI DTVVVGEIVC SKRSPFIAEH IPAVVERLSA
CGKDVVMGSL TLMSLTRERN AMAELAAAPE LTMEVNDLSC LGMLGDRPHA IGPFVNIYNE
ATAKYFASHG AKRICLPPEL PLTAIRTIAA ALPDVIFEVF GFGRAPLAIS ARCYHARLNK
LSKDNCKFVC EQDPDGLAVF TLDNEPFLAM NGVQTLSYAC TSVLGEIDDL TEAGVRSLRL
SPQQCDMVEV AKVYRDVIDG KRSVAEGAAA LTTIYPVPVA NGFLYAKPGS TFITNVTEAQ
RTARAL
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