| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4770 |
|---|
| Symbol | pgk |
|---|
| ID | 3972805 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | + |
|---|
| Start bp | 5331991 |
|---|
| End bp | 5333187 |
|---|
| Gene Length | 1197 bp |
|---|
| Protein Length | 398 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637927882 |
|---|
| Product | phosphoglycerate kinase |
|---|
| Protein accession | YP_534611 |
|---|
| Protein GI | 90426241 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0126] 3-phosphoglycerate kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAT CATTCCTCAC GCTCGATGAC GCCGACCTGA AGGGCAAACG CGTGCTGTTG
CGCGTCGATA TCAACGTGCC GGTGGACGCC GGCAAGGTCA CCGACACCAC CCGGCTCGAC
CGCATCGCCC CGACCATCCT GGAAATCGCC GACAAGGGCG GCAAGGTGAT CCTGCTGGCG
CATTTCGGCC GGCCGAAAGG CCCCGATCCC AAGGAATCGC TGCGACCGAT CGCCGCCGCC
CTCGCCGAGG TGCTGAAGCG CCCGGTGGCG TTCGCCGAGG ATTGCATCGG CGAGGTCGCG
GCGTCCGCGA TCGCCAAGCT GCAGGACGGC GACATCCTGT GCCTGGAGAA CACCCGCTTC
CACAAAGGCG AGGAAAAGAA CGATCCCGCC TTCGTCGACG AATTGGCCAA GCTCGGCGAC
CTCTGGGTCA ACGACGCGTT CTCCGCCGCG CACCGCGCCC ATGCCTCGAC CGAAGGCATC
GGCCACAAGC TGCCGGCCTA TGCCGGGCGC ACCATGCAGC TTGAGATCGA CGCGCTGAAC
AAAGCGCTGG AAGCGCCGAA GCGCCCGGTG ATCGCCATCG TCGGCGGCGC CAAGGTCTCC
AGCAAGATCG ATCTGTTGGA AAACCTCGTC ACCAAGGTCG ACGCGCTGGT GATCGGCGGC
GGCATGGCCA ACACCTTCCT GCACGCCCAG GGCATCAATG TCGGCAAGTC GCTGTGCGAG
AAGGATCTGG CGCCGACCGC GCTGCGCATC ATCGCCAAGG CCGAGGCCGC CAATTGCGCG
ATCATCCTGC CGGTCGACGC CACCGTCGCC TATCACTTCG CCCCCAACGC CCCGGCCTTC
GCCTATGGCC TCGACTCGAT CCCGGCCGAC GGCATGATCC TCGACGTCGG TCCGCGTTCG
GTGGCGCGAA TCAACGCCGC GATCGACGAC GCCTCGACCC TGGTCTGGAA CGGCCCGGTC
GGCGCCTTCG AACTGCACCC GTTCGACGCC GGCACCGTGG CGGCCGCGCA GCACGCCGCG
GCGCGCACCA AGGCGCACAA GCTGGTGTCG GTGGCGGGCG GCGGCGACAC CGTCGCAGCG
CTCAACCAAG CGGGCGTCGC GGGCGACTTC ACCTACATCT CGACCGCTGG CGGCGCCTTC
CTGGAATGGA TGGAAGGCAA GCCGTTGCCC GGCGTCGAGG TGCTGCGGCC GCAATGA
|
|---|
| Protein sequence | MKKSFLTLDD ADLKGKRVLL RVDINVPVDA GKVTDTTRLD RIAPTILEIA DKGGKVILLA
HFGRPKGPDP KESLRPIAAA LAEVLKRPVA FAEDCIGEVA ASAIAKLQDG DILCLENTRF
HKGEEKNDPA FVDELAKLGD LWVNDAFSAA HRAHASTEGI GHKLPAYAGR TMQLEIDALN
KALEAPKRPV IAIVGGAKVS SKIDLLENLV TKVDALVIGG GMANTFLHAQ GINVGKSLCE
KDLAPTALRI IAKAEAANCA IILPVDATVA YHFAPNAPAF AYGLDSIPAD GMILDVGPRS
VARINAAIDD ASTLVWNGPV GAFELHPFDA GTVAAAQHAA ARTKAHKLVS VAGGGDTVAA
LNQAGVAGDF TYISTAGGAF LEWMEGKPLP GVEVLRPQ
|
|---|
| |