| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4766 |
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| Symbol | |
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| ID | 3972801 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 5328136 |
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| End bp | 5330196 |
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| Gene Length | 2061 bp |
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| Protein Length | 686 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637927878 |
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| Product | transketolase |
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| Protein accession | YP_534607 |
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| Protein GI | 90426237 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0021] Transketolase |
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| TIGRFAM ID | [TIGR00232] transketolase, bacterial and yeast |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGATGGC AGCCGATCGG TACGGCGGGC CGCAACGTTC ATGATCCTCT CACTCAGGCG
GTAGCTCTCA TGACGCAGGT CGATTCCTCC CGTATGGCCA ATGCAATCCG CGCGCTGGCG
ATGGACGCCG TGGAGAAGGC GAAGTCCGGC CACCCCGGAT TACCGATGGG CGCCGCCGAC
ATCGCCACCG TGTTGTTCAG CCAATTCCTG AAATTCGACG CCGAGGACCC GCGCTGGCCG
GATCGCGACC GCTTCGTGCT GTCCGCCGGG CACGGCTCGA TGCTGCTCTA CGCGCTGTTC
TATCTGACCG GCAATGAGGA CGTCACGCTC GACCAGATCA AGAATTTCCG CCAGCTCGAC
TCCAAGACTC CCGGCCATCC GGAGAACTTC ATCACCGCCG GCGTCGAGAC CACCACCGGC
CCGCTCGGCC AGGGCGTGGC GTCGTCGGTC GGGACTGCAT TGGCCGAGCG GCTGCTGGCG
GCGGAGTTCG GCGACGACAT CGTCGACCAC TACACCTACG TGCTGTGCTC CGACGGCGAC
CTGATGGAGG GCGTCAGCCA CGAGGCGATC GCGCTCGCCG GCCACCTCAA GCTATCCAAG
CTGATCTTCC TCTACGACGA CAACGGCATC TCGATCGACG GTCCGCTGAC GTTGTCGGAC
AGCGTCGACC AGGTCGCCCG CTTCAAGGCG CACGGCTGGA ACGCGGTGCA GATCGACGGC
CACGACCAGA AGGCGATCGC CGCAGCCATC ACCCAGGCGC AGAGCTCCGA TCGTCCGACG
ATGATCGCCT GCAAGACCAC GATCGGATTC GGCGCGCCGC ACAAGGCCGG CACCTCCAAG
GCCCACGGCG AGCCGCTCGG CGCTGAGGAA TTGGCCGGCG CCAAGAAGGC GCTGGGCTGG
AATTACGGCC CGTTCGAGAT CCCCGAGGAC GTGCTGCACG CCTGGCGCAA TGTCGGCCGC
GAAGGCGCCA GCGCCCATGC CGATTGGCGA CAGCGTTTCG AGGCGATGGA AGACACCAAG
CGCAGCGAAT TCCAGCGCCG GGTGGTCGAT CGCAAGCGCC CCGAGGTGCT CGGCGACACC
ATCCGGGCGC TGAAAGACAA GCTGGTCGCC GAGCCGCAGA CCATCGCCAC CCGCAAGGCC
AGCGAACTGG TGCTGGAGGC GATCGAGCCG ATCATGCCGG AATTGCTGCT CGGCTCGGCC
GATCTGACGC CGTCCAACAA CACCCGCGTC AAGTCCGCCA AGGACGTCAA GCCGGGGGAT
TTTTCCGGCC GCTACATCCA TTACGGCATC CGCGAAATGG GCATGGCGGC GGCGATGAAC
GGTATCTCCG CGCATGGCGG CTTCGCTCCG GCCGGCGGTA CTTTCATGTG TTTCACCGAC
TATGCGCGCC CTTCGATGCG GATCGCGGCG CTGTCGCACA CCCCGGTGGT CTACATCATG
ACCCACGATT CCATCGGGCT CGGCGAAGAC GGCCCGACCC ACCAGCCGGT GGAGCATCTG
GCGTCCTTGC GGGCGATGCC GAACCTGCGG CTGTTCCGCC CGGCCGATCC GGTCGAGACC
GCCGAATGCT GGCAGCTGGC GCTGGAATAT ACCACCGGCC CGACCGTGCT GGCGCTGTCG
CGGCAGAATC TGCAGCCGGT TCGCACCACC TCCCACCCGG ACAATCTCTG CGCGCAGGGC
GCCTACGAGC TGGTCGCCGC CGACGGCGCG GCCGAAGTGT CGCTGTTCGC CTCCGGCTCC
GAGGTGGAAA TCGCGGTGGC CGCGCAGAAG CTATTGGCGG AGCGCGGCAT CCCGACCCGG
GTGGTCTCGG TACCCTCGCT CGACCTGCTG CTGCTGCAGA AGGACGAGGT TCGCCATGGC
ATCATCGGCG AGGCGCGGGT CAAAGTCGCG GTCGAGGCCG CGGTGCGGTT CGGCTGGGAC
GCGGTGATCG GGCCGGACGG CGGCTTCGTC GGCATGAGTT CGTTCGGCGC CAGCGCCCCG
GCGAAGGACC TCTACAAGCA TTTCGGCATC ACCGCGGAGG CCGTGGTGAA GGCCGCCACC
GAACGGCTGC AGCGGAACTA G
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| Protein sequence | MRWQPIGTAG RNVHDPLTQA VALMTQVDSS RMANAIRALA MDAVEKAKSG HPGLPMGAAD
IATVLFSQFL KFDAEDPRWP DRDRFVLSAG HGSMLLYALF YLTGNEDVTL DQIKNFRQLD
SKTPGHPENF ITAGVETTTG PLGQGVASSV GTALAERLLA AEFGDDIVDH YTYVLCSDGD
LMEGVSHEAI ALAGHLKLSK LIFLYDDNGI SIDGPLTLSD SVDQVARFKA HGWNAVQIDG
HDQKAIAAAI TQAQSSDRPT MIACKTTIGF GAPHKAGTSK AHGEPLGAEE LAGAKKALGW
NYGPFEIPED VLHAWRNVGR EGASAHADWR QRFEAMEDTK RSEFQRRVVD RKRPEVLGDT
IRALKDKLVA EPQTIATRKA SELVLEAIEP IMPELLLGSA DLTPSNNTRV KSAKDVKPGD
FSGRYIHYGI REMGMAAAMN GISAHGGFAP AGGTFMCFTD YARPSMRIAA LSHTPVVYIM
THDSIGLGED GPTHQPVEHL ASLRAMPNLR LFRPADPVET AECWQLALEY TTGPTVLALS
RQNLQPVRTT SHPDNLCAQG AYELVAADGA AEVSLFASGS EVEIAVAAQK LLAERGIPTR
VVSVPSLDLL LLQKDEVRHG IIGEARVKVA VEAAVRFGWD AVIGPDGGFV GMSSFGASAP
AKDLYKHFGI TAEAVVKAAT ERLQRN
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