Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_4760 |
Symbol | |
ID | 3972795 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 5323703 |
End bp | 5324902 |
Gene Length | 1200 bp |
Protein Length | 399 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637927872 |
Product | Bcr/CflA subfamily drug resistance transporter |
Protein accession | YP_534601 |
Protein GI | 90426231 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00710] drug resistance transporter, Bcr/CflA subfamily [TIGR00880] Multidrug resistance protein |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.579597 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAGCT TTGCCAGGAA TGCTGTGGTG CTCGGGTTGC TGTCGGCGGT CGGACCGTTC GCCATCGACA TGTATCTGCC GGCGCTGCCC TCGATCGCAG CCGATCTGAA CGCCTCGACC GCCGCCGCGC AATTGTCGCT GACGGTGTAC TTCCTGGCGT TCGGCGTGTT CCAGATCTTA TACGGTCCAA TCTCCGACAT GGTCGGCCGC AAGCCGCCGC TCTATCTCGG GCTTTCGCTG TTCGCACTGG GCGCGATCGG CGGCGCGCTG GCGCCCTCGA TCGGCTGGTT GATCGCCGCA AGAGTGCTGC AGGGCGTCGG CGCCGCGGCG GTCACGGTGA TCCCCCGCGC CATCATCCGC GACCTGCATA CCGGTGCGGA GGCCACCCGG TTGATGGCGA TGGTGATGCT GGTGTTCGGC GTCTCGCCGC TATTGGCTCC GCTGTTCGGC AGCGCGTTGA TCGGCTTGGT CGGCTGGCGC GCGGTGTTCG TGGCGATGAC GATCGCCGCG CTGCTCGGTC TGCTGCTGGT CGGGCTGTTG CTGCCGGAGA CCCGGCCGAT CGCGCATCGC AGCAAGGGCG GGGTCGGACC GGTGATGGGC AACTTCGCGG TGCTGTTGCG CGACCGACAG TTCGTGGGGC TGGTGTTGAT CGGCGGGTTC GGCATGGCGA GCTTCTTCAG CTTCCTGGCC GGCTCGTCGT TCATCTATAT CGGCCATTTC GACCTGACGC CGACGCAATA CAGCCTGGCT TTCGCGCTGA ACGCGATCGG CTTCATCGGC GCCTCGCAAT TCGCCGCGCC GCTCGGCGCG CGGCTTGGCA TGCGCCGCGT GGTGATCATC GCGGTGTCGC TCTACGCCGG CTTCGCGCTG CTGCTGCTGG CGCTGACCTT GTCCGGGGTC GATCAGTTCG CGGTGTTGAT GGCGATGTTG TTCGTGATCT TCGGCTGCCT CGGCGTGGCG TTGCCGCAGA CCATGGTGCT GTCGCTGGAA AGCCACGGTC CGATCGCCGG CGCCGCTTCC GCGCTGTCGG CGACGCTGCA GATGCTGATC GGCGCCGCGT TGATCGCGTT GATCAGCCTG TTCGAAAACG GCACCGCGCT GCCGATGGTG GCAGGAATCG CGGTCGCCGC CTGCACGGCG CTCGGCGTCA CGCTGGCCAC GCTGCGCCGG CGTGAGCCGC TGCCGCAGCC GGCGGAGTAA
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Protein sequence | MSSFARNAVV LGLLSAVGPF AIDMYLPALP SIAADLNAST AAAQLSLTVY FLAFGVFQIL YGPISDMVGR KPPLYLGLSL FALGAIGGAL APSIGWLIAA RVLQGVGAAA VTVIPRAIIR DLHTGAEATR LMAMVMLVFG VSPLLAPLFG SALIGLVGWR AVFVAMTIAA LLGLLLVGLL LPETRPIAHR SKGGVGPVMG NFAVLLRDRQ FVGLVLIGGF GMASFFSFLA GSSFIYIGHF DLTPTQYSLA FALNAIGFIG ASQFAAPLGA RLGMRRVVII AVSLYAGFAL LLLALTLSGV DQFAVLMAML FVIFGCLGVA LPQTMVLSLE SHGPIAGAAS ALSATLQMLI GAALIALISL FENGTALPMV AGIAVAACTA LGVTLATLRR REPLPQPAE
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