Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_4751 |
Symbol | tolB |
ID | 3972727 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 5316908 |
End bp | 5318260 |
Gene Length | 1353 bp |
Protein Length | 450 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637927863 |
Product | translocation protein TolB |
Protein accession | YP_534592 |
Protein GI | 90426222 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
TIGRFAM ID | [TIGR02800] tol-pal system beta propeller repeat protein TolB |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCCGTGA TGTCGTCCCG TCTTCCCGCT CTGCCGCTGA GCCGTCGCCA GGCCTTGCTC GGCGGCGCCG GCTCCGCCGC CGCCTTGCTG CTGCCCGGTG GCGCGCAGGC GCAGACCAGG CTGCAGATCA CCGAGGGCAA CGTCGCCCCG ATGCCGATCG CGATTCCGAA TTTCGTCGCC GGCACGCCGG CCGACAACGA GGTCGGCCTT GGCGTGGCCC AGGTGATCAC CAACAACCTG AAGCGCAGCG GGCTGTTCGC GCCGATCGAT CAGGCGGCCT TCATCGAGCG GATCAGCAAT ATCGACACCC CGCCGCAGTT TCAGAGCTGG AAGACCATCA ACGCCCAGGC GCTGGTGACC GGCCGCATGA CCAAGCAGGG CGACGGCCGG CTGAAAGCCG AGTTCCGGCT GTGGGATGTG GCGGCCGGCC AGCAACTCAC CGGCCAGCAA TATTTCACCT CGCCGGAATA TTGGCGGCGC ATCGCCCATA TCATCTCCGA TCAGATCTAC GAGCGGCTGA CCGGCGAGAA GGGCTATTTC GACAGCCGTG TGGTGTTCAT CGACGAGACC GGCTCCAAGG AACGCCGCGT CAAGCGGCTG GCCTTGATGG ATCAGGACGG CGCCAATGTG CGCTATCTGA CCCGCGGCGC CGATCTGGTG CTGACGCCGA GGTTCTCGCC GTCGACCCAA GAGATCACCT ATATGGAATT CGGCCAGGGC GACCCCAGGG TCTATCTGTT CAACATCGAG ACCGGGCAGC GCGAGATCGT CGGCAATTTT CCCGGCATGT CGTTTTCGCC GCGGTTTTCG CCGGACGGCC AGCGCGTCAT CATGAGCCTG CAGCAGGGCG GCAACTCCAA CCTGTTCGTG ATGGATCTGC GCTCCAAGTC CACCACCCGG CTGACCGATA CGCCGGCGAT CGACACCTCG CCGTCCTATG CGCCGGACGG CAGCAAGATC TGCTTCGAGA GCGATCGCGG CGGCAAGCCG CAGATCTATG TGATGCCCGC CGGCGGCGGC GGCGCGCAGC GGATTTCGTT CGGCGAGGGC AGCTATTCGA CCCCGGTGTG GTCGCCGCGC GGCGACTACA TCGCCTTCAC CAAGCAGGGC GGTGGGCAGT TTTCGATCGG CATCATGAAG CCCGACGGCT CCGGCGAGCG GCTGCTGACC TCCGGCTATC ACAACGAGGG CCCGACGTTT GCGCCGAACG GCCGCGTGCT GATGTTCTTC CGCGACCCCG GCGGCAATGG CGGTCCCTCG TTGTTCACGG TCGATATCTC CGGCCGCAAC GAACAGAAGG TGCCGACCCC GGGCTTCGCC TCCGACCCGG CGTGGTCGCC GCTGCTGTCC TGA
|
Protein sequence | MSVMSSRLPA LPLSRRQALL GGAGSAAALL LPGGAQAQTR LQITEGNVAP MPIAIPNFVA GTPADNEVGL GVAQVITNNL KRSGLFAPID QAAFIERISN IDTPPQFQSW KTINAQALVT GRMTKQGDGR LKAEFRLWDV AAGQQLTGQQ YFTSPEYWRR IAHIISDQIY ERLTGEKGYF DSRVVFIDET GSKERRVKRL ALMDQDGANV RYLTRGADLV LTPRFSPSTQ EITYMEFGQG DPRVYLFNIE TGQREIVGNF PGMSFSPRFS PDGQRVIMSL QQGGNSNLFV MDLRSKSTTR LTDTPAIDTS PSYAPDGSKI CFESDRGGKP QIYVMPAGGG GAQRISFGEG SYSTPVWSPR GDYIAFTKQG GGQFSIGIMK PDGSGERLLT SGYHNEGPTF APNGRVLMFF RDPGGNGGPS LFTVDISGRN EQKVPTPGFA SDPAWSPLLS
|
| |