| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4743 |
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| Symbol | |
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| ID | 3972719 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 5307302 |
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| End bp | 5309218 |
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| Gene Length | 1917 bp |
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| Protein Length | 638 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637927855 |
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| Product | ATP-dependent metalloprotease FtsH |
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| Protein accession | YP_534584 |
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| Protein GI | 90426214 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0465] ATP-dependent Zn proteases |
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| TIGRFAM ID | [TIGR01241] ATP-dependent metalloprotease FtsH |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCCA ATCTGCGCAA TTTCGCCCTG TGGGTTATTA TCGTCTTGCT GCTGCTGGCG
CTCTTCACGC TCTTCCAGAA TCCCGGCCAA CGGGTCGCCT CGCAGGATAT CTCGTTCTCG
CAGCTGCTGA GCGAGGTCGA TCAGAACAAG GTTCGCGACG TGGTGATCCA GGGGCCGGAA
ATTCACGGCA CCTTCACCAA CGGCTCCAGC TTCCAGACCT ACGCGCCGAA CGATCCGACG
CTGGTTTCGC GGCTCTATAA CGGCAAAGTC TCGATCACCG CGAAGCCGCC GGGCGACAAC
GTGCCGTGGT TCGTGTCGCT GTTGGTCTCG TGGTTGCCGT TCATCGCGCT GATCGGCGTC
TGGATCTTCC TGTCGCGCCA GATGCAGGGC GGCGCCGGCA AGGCGATGGG CTTCGGCAAG
TCGCGCGCCA AGATGCTGAC CGAGGCGCAT GGCCGGGTGA CGTTCGAGGA CGTCGCCGGC
GTCGACGAGG CCAAGCAGGA CCTGCAGGAG ATCGTCGAGT TCTTGCGCGA CCCCGGCAAG
TATCAGCGGC TCGGCGGCCG CATCCCGCGC GGCGTGCTGC TGGTCGGCCC TCCCGGTACC
GGTAAGACGC TGATCGCACG TGCGGTCGCC GGCGAAGCCA ACGTGCCGTT CTTCACCATC
TCGGGTTCCG ACTTCGTCGA AATGTTCGTC GGCGTCGGCG CCAGCCGCGT CCGCGACATG
TTCGAGCAGG CCAAGAAGAA CGCGCCCTGC ATCATCTTCA TCGACGAAAT CGACGCGGTC
GGTCGCCATC GTGGCGCCGG TCTCGGCGGC GGCAATGATG AGCGTGAGCA GACCCTGAAC
CAGTTGCTGG TCGAGATGGA CGGCTTCGAG GCCAATGAAG GCGTGATCCT GATCGCGGCC
ACCAACCGTC CCGACGTGCT CGATCCCGCC TTGCTGCGTC CCGGCCGGTT CGACCGCCAG
GTGGTGGTGC CGAATCCGGA CGTCGTCGGT CGCGAACAGA TCTTGAAAGT TCACGTCCGC
AAGGTGCCGC TGGCGCCGGA TATCAACCTC AAGGTGATTG CGCGCGGCAC GCCTGGTTTT
TCGGGTGCCG ACCTGATGAA CCTGGTCAAC GAAGCAGCCT TGACCGCCGC CCGCCGCAAC
AAGCGGATGG TGACCCAGGC CGAATTCGAA GAGGCCAAGG ACAAGGTGAT GATGGGCGCC
GAGCGCAAGT CGCTGGTGAT GACCGAGGAA GAGAAGATGC TGACGGCCTA TCACGAGGGC
GGTCACGCCA TCGTCGGCCT CAACGTCATC GCCACCGACC CGATCCACAA GGCCACCATC
ATTCCGCGCG GACGTGCGCT CGGCATGGTG ATGCAGCTGC CGGAACGCGA CAAGCTGTCG
ATGTCGCTGG AGCAAATGAC CTCGCGGCTC GCCATCATGA TGGGCGGCCG GGTTGCCGAA
GAGCTGATCT TCGGCCGCAA CAAGGTCACC TCGGGCGCGT CGTCGGATAT CGAGCAGGCC
ACACGGCTTG CCCGGATGAT GGTGACGCGG TGGGGCCTGT CCGAAGAACT CGGCACGGTG
TCCTATGGCG AGAACCAGGA CGAGGTGTTC CTCGGCATGT CGGTGTCGCG CACCCAGAAC
GCTTCCGAGG CGACGGTCCA GAAGATCGAC GCCGAGATCA AGCGGCTGGT GGAAGAAGGC
TACAACGAGG CCACCAAGAT CCTCACCGAG AAGCGCGCCG ATCTCGAAGC GCTCGCCAAG
GGCCTGCTGG AATTCGAAAC CTTGAGCGGC GACGAGATCC AGGACCTGCT GAACGGCAAG
AAGCCGAATC GCGAATCGGT GCTGGAGCCC GCCGGTCCGC GGACCTCGGC GGTGCCGCCG
GCCGGTAAAC CGCGCCCTCG TCCCGACGCC GGCTTGGAGC CGCAGCCGCA GGCGTAA
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| Protein sequence | MNANLRNFAL WVIIVLLLLA LFTLFQNPGQ RVASQDISFS QLLSEVDQNK VRDVVIQGPE
IHGTFTNGSS FQTYAPNDPT LVSRLYNGKV SITAKPPGDN VPWFVSLLVS WLPFIALIGV
WIFLSRQMQG GAGKAMGFGK SRAKMLTEAH GRVTFEDVAG VDEAKQDLQE IVEFLRDPGK
YQRLGGRIPR GVLLVGPPGT GKTLIARAVA GEANVPFFTI SGSDFVEMFV GVGASRVRDM
FEQAKKNAPC IIFIDEIDAV GRHRGAGLGG GNDEREQTLN QLLVEMDGFE ANEGVILIAA
TNRPDVLDPA LLRPGRFDRQ VVVPNPDVVG REQILKVHVR KVPLAPDINL KVIARGTPGF
SGADLMNLVN EAALTAARRN KRMVTQAEFE EAKDKVMMGA ERKSLVMTEE EKMLTAYHEG
GHAIVGLNVI ATDPIHKATI IPRGRALGMV MQLPERDKLS MSLEQMTSRL AIMMGGRVAE
ELIFGRNKVT SGASSDIEQA TRLARMMVTR WGLSEELGTV SYGENQDEVF LGMSVSRTQN
ASEATVQKID AEIKRLVEEG YNEATKILTE KRADLEALAK GLLEFETLSG DEIQDLLNGK
KPNRESVLEP AGPRTSAVPP AGKPRPRPDA GLEPQPQA
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