Gene RPC_4740 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_4740 
Symbol 
ID3972716 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp5304789 
End bp5305604 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content67% 
IMG OID637927852 
Producthypothetical protein 
Protein accessionYP_534581 
Protein GI90426211 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.107492 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCCGC CGCCATCCGT CCGGTCCGTG ACCGAGCGAC TGAAAGCCTT GCTGCCGCCG 
GACGGCACGC CGGTGCTCAA CCGGGTGCTG CGGCTGATGC TGTCGCGGGA TTTCGGCCAG
TCAATCAGCG ACGCGCTCTA CGAGCAAGCG CGCGACAGCC TGTTCGCCTC GGGGCAGATC
GGCCGGCTAC GCGGCCAGGG CGGGCAAGTG TTTCTCGCCA AGAGCGACAA TGGCGGCGTC
GCCGAACCAA CAGCCTCCGA TGCCGGCTCG AAACTATCCG AGAGCGAGCT GATGCCGCAT
CTCGGGCGCT ATCTGAAAAC CGCATTTCGC AAGGAGCTCG ACATCCCGGC CCATGGCGAA
TGGCTGGTCA AGGATACGTC GCAGATGGGA CCGCCGCGCG GGCGCTGGGC GCGGCCGGAC
TTCGTGCTTC TGACCGCGAT GCGGTTTCGG GTGATGCCTG GCGCGCAGCT CGACGTCTAT
TCCTTCGAGC TGAAAGCCGA ATACGGCGCC ACTGACCTCG CGGTCTATGA GGCGCTGGCG
CAGACCCGCT TCACCCATTT CGGCTATCTG GTCTGGCATC TGCCGGAGGG ATCGCCGGCC
GGAGCGCGGC TTCCGGACAT CACCGGGCAG TGTGGTCAGC ACGGCATCGG GCTGATCCGC
GTCCATGAGC CGGCCACCGA CGACGGCTTC GAGACCGTGC TCGATCCGAT CCGCAAGCCG
ACGCCGCCGG CCGCGGTCGA CAGTTTCCTG GAGCGGCGGT TGTCCGAAGA CGAGCAGAAG
CTGCTGCGGA GCGCGTTGGC GGGGACCGCA GCATGA
 
Protein sequence
MPPPPSVRSV TERLKALLPP DGTPVLNRVL RLMLSRDFGQ SISDALYEQA RDSLFASGQI 
GRLRGQGGQV FLAKSDNGGV AEPTASDAGS KLSESELMPH LGRYLKTAFR KELDIPAHGE
WLVKDTSQMG PPRGRWARPD FVLLTAMRFR VMPGAQLDVY SFELKAEYGA TDLAVYEALA
QTRFTHFGYL VWHLPEGSPA GARLPDITGQ CGQHGIGLIR VHEPATDDGF ETVLDPIRKP
TPPAAVDSFL ERRLSEDEQK LLRSALAGTA A