| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4737 |
|---|
| Symbol | |
|---|
| ID | 3972713 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | - |
|---|
| Start bp | 5302758 |
|---|
| End bp | 5303432 |
|---|
| Gene Length | 675 bp |
|---|
| Protein Length | 224 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 637927849 |
|---|
| Product | TetR family transcriptional regulator |
|---|
| Protein accession | YP_534578 |
|---|
| Protein GI | 90426208 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTTTACC GGCGCACCCA GCAAGTCGTC AAACGTCTTG CAGCTCGCCG CCAGGCGATT
CTCTCCGCCG CGCGAGAGAC CGCCGCCGAA GGCGGTATGG CGGCCGTGCA GATCGCCCCG
GTCGCGACCC GGGCGCGCGT CGCCGCCGGC ACTGTGTACC GTTACTTTCC CTGCAAGGCC
GACCTGATCT CCGAACTGAT CGCCGAGGTG TCGCGCGACG AACTGGCGGC GATCCGCCGC
GCCGCCGATG CAGCACCCGG ACCGTCCTCG GCGCTCGCCG CCGCGGTCAC CACGGTGGCG
GTACATGTGC TGTCGCATCG CAAATTGGCC TGGGGCATTT TGGCCGAGCC GGTCGACGTC
GACGTCACCG CGTCCAGGCT CGCCAGCCGC CGCGAAATCG CCGGCGAGAT CGAATTGCGC
ATTGTCGCCG CGGTGCGCGC CGGGCATCTG CCGGCGCAGG ATACGGCACT CGCCGCCACC
GCGCTGCTCG GCGCGCTGCA TGAATCGCTG GTCGGGCCGC TGGCGCCGGA CAATCTCGAC
GACGCCGGCC GGCTGCGCGA CGCGGTGCAG ACCGTGACGC TGTTGGCGCT GCGCGCGGTC
GGCGTGATGG ACGCCCGCGC CCGCGGCCTG GTGGTACAGG CGGTGATGCC GGCGCGGATT
CTGGTCGGCG CCTGA
|
|---|
| Protein sequence | MVYRRTQQVV KRLAARRQAI LSAARETAAE GGMAAVQIAP VATRARVAAG TVYRYFPCKA
DLISELIAEV SRDELAAIRR AADAAPGPSS ALAAAVTTVA VHVLSHRKLA WGILAEPVDV
DVTASRLASR REIAGEIELR IVAAVRAGHL PAQDTALAAT ALLGALHESL VGPLAPDNLD
DAGRLRDAVQ TVTLLALRAV GVMDARARGL VVQAVMPARI LVGA
|
|---|
| |