| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4736 |
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| Symbol | |
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| ID | 3972712 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 5301197 |
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| End bp | 5302690 |
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| Gene Length | 1494 bp |
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| Protein Length | 497 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637927848 |
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| Product | FAD linked oxidase-like |
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| Protein accession | YP_534577 |
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| Protein GI | 90426207 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
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| TIGRFAM ID | [TIGR00387] glycolate oxidase, subunit GlcD |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.369244 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGATCA AGATGCCGGA GCCGGATCAG GCCGTGCTGG CGCGCCGCGA CGAGATCGTC
GCCGCCTTGC GCAAGATCGT GCCGGGCGAG GGGGTGATCT CCTCGGCCGC CGAGATGATC
CCTTACGAGT CCGACGGGCT GATGGCGTAT CGGCAGCCGC CGATGCTGGT GGTGCTGCCG
GACACCACCA AACAGGTCTC GCAGGTGCTG AAATATTGCC ACGCCAACGG CATCCGCGTG
GTGCCGCGCG GCTCCGGCAC CTCGCTGTCC GGCGGTGCGC TGCCGCTCGC CGACGGCGTG
CTGCTGGGCT TAAGCAAATT CAAGCGGATC CGCGAGATCG ATTTCGACAA CCGCGCCGTG
GTGGTGGAGC CCGGCGTCAC CAACCTCGCG ATCAGCCAGG CGGTCGATCA CCGCGGCTTC
TACTACGCGC CGGACCCGTC GTCGCAGATC GCCTGTTCGA TCGGCGGCAA CATCGCGGAG
AATTCCGGCG GCGTGCATTG CCTGAAATAC GGCATGACCA CCAACAACGT GCTCGGCTGC
GAGATCGTGC TGATCAGCGG CGAGATCATC AAGGTCGGCG GCAAGACCGC TGAGACTTGC
GGATACGACG TGATGGGCAT CATCACCGGC TCCGAGGGCC TGCTCGGCGT CATCACCGAG
GTCACGGTGC GGATTCTGCA AAAGCCCGAA ACCGCGCGCG CGCTGATGGT CGGCTTCGCC
GATGTCGAGG CCGCCGGCGA ATGCGTGGCG CGGGTCATCG GCGCCGGCAT CATTCCGGGC
GGCATGGAGA TGATGGATCG GCCTGCGATC CACGCCGCCG AAGCTTTTGT CCACGCCGGC
TATCCGCTGG ATGTGGAGGC GCTGCTGATC ATCGAACTCG ATGGTCCCGG CGTCGAGGTC
GACGAGCTGA TCAGCCGGGT CGAGAGCATC GCGCTGTCCT GCGGCTCGAC CACCTGCCAG
ATCTCGATCT CGGAGAAGGA GCGGCTGCTG TTCTGGGCCG GCCGCAAAGC GGCGTTCCCG
GCGGTCGGGC GGATTTCGCC AGACTATCTG TGCATGGACG GCACCATCCC GCGCAAGCAA
TTGCCGCTGG TGTTGCGCCG GATGAAAGAG ATGTCGGAAA AATACGGCCT CGGCGTCGCC
AACGTATTTC ACGCCGGCGA CGGCAACCTG CACCCGCTGA TTTTGTACGA CGCCAACAAG
CCCGGCGAGA TGGACAAGGC GGAAGCGTTC GGCGCCGACA TCTTGCGGCT TTGCGTCGAG
GTCGGCGGCG TGCTGACCGG CGAGCACGGC GTCGGCATCG AGAAGCGCGA CCTGATGCCG
GAGATGTTTT CCGAGATCGA CCTCAACCAG CAGCAGCGGC TGAAATGCGC CTTCGACAAG
GACGGCCTGC TCAACCCCGG CAAGGTGTTT CCGACGCTGC ATCGCTGCGC CGAATTGGGC
CGCGTCCACG TCCATGGCGG CAGACTGGCG TTCCCGGACA TTCCGCGGTT TTGA
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| Protein sequence | MSIKMPEPDQ AVLARRDEIV AALRKIVPGE GVISSAAEMI PYESDGLMAY RQPPMLVVLP
DTTKQVSQVL KYCHANGIRV VPRGSGTSLS GGALPLADGV LLGLSKFKRI REIDFDNRAV
VVEPGVTNLA ISQAVDHRGF YYAPDPSSQI ACSIGGNIAE NSGGVHCLKY GMTTNNVLGC
EIVLISGEII KVGGKTAETC GYDVMGIITG SEGLLGVITE VTVRILQKPE TARALMVGFA
DVEAAGECVA RVIGAGIIPG GMEMMDRPAI HAAEAFVHAG YPLDVEALLI IELDGPGVEV
DELISRVESI ALSCGSTTCQ ISISEKERLL FWAGRKAAFP AVGRISPDYL CMDGTIPRKQ
LPLVLRRMKE MSEKYGLGVA NVFHAGDGNL HPLILYDANK PGEMDKAEAF GADILRLCVE
VGGVLTGEHG VGIEKRDLMP EMFSEIDLNQ QQRLKCAFDK DGLLNPGKVF PTLHRCAELG
RVHVHGGRLA FPDIPRF
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