| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4721 |
|---|
| Symbol | |
|---|
| ID | 3972697 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | + |
|---|
| Start bp | 5282323 |
|---|
| End bp | 5283147 |
|---|
| Gene Length | 825 bp |
|---|
| Protein Length | 274 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637927833 |
|---|
| Product | putative periplasmic ligand-binding sensor protein |
|---|
| Protein accession | YP_534562 |
|---|
| Protein GI | 90426192 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3416] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACACCGC AAGAACGCCA GTTGGTCGAC GATCTGTTTG ATCGGCTCGC CCGCGTCGAA
ACCGCGCCGC GCGATCCGAA TGCCGCCGAC GCGATTGCGC AAGGGCTGCG CCGCGCCCCC
AACGCGGTCT ATGCGCTGGT GCAGACCGTG CTGGTGCAGG ACGAGGCGCT GAAGCGCGCC
GATGCCCGGA TTCAGGAATT GGAAGGCGGC GCCGCGCACG AGCCGGAGCG GCCGGGCAGC
TTCCTCGATT CGATGCGCGG CGCGCTGTTC GGCAACGAGC AGCCGCGCGG CTCGGTGCCG
AATGTGCGAC CGCCGGAGCC GGCGGGTCGC CCGGCCTGGA ACACCGGGCA GGTGCTGCCG
CAGGCCGGCG GATTTAACCG CGAACCCTAT GGCCAGGGCC AACCCAATCA GCAGCCCTAC
GCCCAACCCG GCTTTGGCGG GCAGCAGCCG GCATTCGGCG GCGGCGGCGG ATCGTTTCTC
GGCACCGCGG CGGCCGCGGC CGCCGGCGTG GTCGGCGGCT CGATGCTGCT GTCCAGCATT
CGCGGCATGA TGGGCGGCAG CGGCAGCCAG CAGAGCTTCG GCGACCAAGC CGGGCTCGGC
AAGGACGGCG GCGAGACCCG CAGCCCGTGG AGCAGCGATC AATCCGGCGG CGATCTCGCC
AAGGACGCCG GGCTGAACGA CGTCGGATCA TCCGGACAGC GCGCCGACGA CAGCTCCTCC
CGCCAGGGCA TGTTCGATCA GGCGTCGAAC GACGATACTG ATCACGACGA CATGGACATG
GATTCCGACG ATTTCGACGA CGGCGGCGAC AGCGACTACG CGTGA
|
|---|
| Protein sequence | MTPQERQLVD DLFDRLARVE TAPRDPNAAD AIAQGLRRAP NAVYALVQTV LVQDEALKRA
DARIQELEGG AAHEPERPGS FLDSMRGALF GNEQPRGSVP NVRPPEPAGR PAWNTGQVLP
QAGGFNREPY GQGQPNQQPY AQPGFGGQQP AFGGGGGSFL GTAAAAAAGV VGGSMLLSSI
RGMMGGSGSQ QSFGDQAGLG KDGGETRSPW SSDQSGGDLA KDAGLNDVGS SGQRADDSSS
RQGMFDQASN DDTDHDDMDM DSDDFDDGGD SDYA
|
|---|
| |