| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4714 |
|---|
| Symbol | |
|---|
| ID | 3972632 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | + |
|---|
| Start bp | 5275265 |
|---|
| End bp | 5275840 |
|---|
| Gene Length | 576 bp |
|---|
| Protein Length | 191 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637927826 |
|---|
| Product | isochorismatase hydrolase |
|---|
| Protein accession | YP_534555 |
|---|
| Protein GI | 90426185 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1335] Amidases related to nicotinamidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCCTCA CCGCACTCGA CCCGCGCTCT GCGCTCGTCG TCATCGACCT GCAGAACGGC
ATCGTGGCGA TGCCGACCGC TGCGCCTGTC GCCCCGATCG TGCAGCGCGC CGCGGCGCTG
GCCGAGGCGT TCCGTCGCCA TCGCCTGCCG GTGGTGCTGG TCAATGTCGC AGGCATCGCG
CCCGGCCGCA CCGAACAATC GCGCCGGCTC GGCGAGTTGC CGCCGGGCTG GACCGACCTG
GTGCCGGAGC TGAACCGGCA GCCCACCGAC CACGTCGTCA CCAAGCACAG CTGGGGCGCC
TTCACCGCCA CCGACCTCGA CGGCTATCTG AAAGCCCAAG GCGTCACCCA GCTGGTGATC
GCCGGGGTCT CCACCAGCAT CGGCGTCGAG ACCACCGCGC GGCAGGCCTA CGAGCTCGGC
TTCAACGTTA CGCTGGCGAT CGACGCCATG ACCGACACTA ACTCGGACGC GCACGCCAAC
AGCGTCGGCC GGATCTTTCC GCGGCTGGGC GAAACCGGCA GCATTGCGCA GATCATCGCG
CTGCTCGACG GCACGCCGTC TGCCGCCGCC TCGTGA
|
|---|
| Protein sequence | MALTALDPRS ALVVIDLQNG IVAMPTAAPV APIVQRAAAL AEAFRRHRLP VVLVNVAGIA
PGRTEQSRRL GELPPGWTDL VPELNRQPTD HVVTKHSWGA FTATDLDGYL KAQGVTQLVI
AGVSTSIGVE TTARQAYELG FNVTLAIDAM TDTNSDAHAN SVGRIFPRLG ETGSIAQIIA
LLDGTPSAAA S
|
|---|
| |