Gene RPC_4702 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_4702 
Symbol 
ID3972620 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp5265374 
End bp5266360 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content72% 
IMG OID637927814 
Productdienelactone hydrolase 
Protein accessionYP_534543 
Protein GI90426173 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0412] Dienelactone hydrolase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.579597 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTTCCG CGTTCCGCGC CGGCTGGCGT CGCGATCAAA TACGGCAGAC ACTCGTCGGC 
ACAACCCGGC TCGAGAGCTG CCCGACCATG GCCCCCGCGC GCTGCATTCG CAACTCCGGC
TCCCGCATGG GCGGACCGCG TGGCCCCCGA TCGGGTGTTG CGCTGCTGGC TGTTGCGGCG
ATGACCTGGT TCGCCGCACC GGCGGCCGCC GCCAATTCGA CGCCGGCGGC GCAGACCATC
GACCTGCCAC GGACGGACGG CGTGCTGCAT GCGCTGCTCT ACAAGCCGGC GGGCGCCGGC
CCGTTCCCGA CGGTGATTGC GCTGCACGGC TGCGGCGGGC TATCCGGCGG CGCCGAGCCG
CTGCGGGCCC GTTATGTCGA CTGGGTCAAT CACCTGCTGA AGGCCGGCAG CGCGGTGCTG
CTGCCGGACA GTTACGGCTC GCGCGAACTC GGCCCGCAAT GCCGGCTCAA GGAACGCCGG
GTGTTTGCCA GGCGCGAGCG GGTCGCCGAC ATTGCCGCGG CGCGGCAATG GCTGCTGCAG
CAGCCCTGGG TGGCCAAGCA GCGCATCAGC CTGCTGGGCT GGGCCAACGG CGCCAGCGCC
TTGCTGTGGG CGGTGCGGCC GCAATCGGCG TTCTCGAACA CCGAGCCGGA TTTCCGCGCC
GCGGTGGCGT TCTATCCGGA CTGCCGGCTG TCGTCCGGGC TCGGCTGGAG CGCGCGGGTG
CCGACGCTGC TGCTGATCGG CGGCAGCGAC GATCTCAGTT CGCCCTCCGC CTGCCGGCAG
ATGATCGAGG GCGCGCGTGG CCGCAGCGCG CTGGCCAAGA TGGTGGTGTA TCCCGGCGCC
ACCCACAGCT TCGACCGCGT CAACGTGCCG TTGCACGACA CCCACGCCAG CGCCAGCACC
GACGAGCCGG ACAACGGTCA TATCGGCTCC GATCCCGCCG CCCGCGCCGA CGCGCAAAAA
CGCGTCGCGG GATGGCTCGG GCGGTAG
 
Protein sequence
MISAFRAGWR RDQIRQTLVG TTRLESCPTM APARCIRNSG SRMGGPRGPR SGVALLAVAA 
MTWFAAPAAA ANSTPAAQTI DLPRTDGVLH ALLYKPAGAG PFPTVIALHG CGGLSGGAEP
LRARYVDWVN HLLKAGSAVL LPDSYGSREL GPQCRLKERR VFARRERVAD IAAARQWLLQ
QPWVAKQRIS LLGWANGASA LLWAVRPQSA FSNTEPDFRA AVAFYPDCRL SSGLGWSARV
PTLLLIGGSD DLSSPSACRQ MIEGARGRSA LAKMVVYPGA THSFDRVNVP LHDTHASAST
DEPDNGHIGS DPAARADAQK RVAGWLGR