Gene RPC_4684 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_4684 
SymbolnifH 
ID3972390 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp5243123 
End bp5243950 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content61% 
IMG OID637927796 
Productnitrogenase reductase 
Protein accessionYP_534525 
Protein GI90426155 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1348] Nitrogenase subunit NifH (ATPase) 
TIGRFAM ID[TIGR01287] nitrogenase iron protein 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACACGCA AGATTGCGAT CTACGGCAAG GGCGGCATTG GCAAATCGAC CACCACCCAG 
AACACCGCGG CGGCGCTGGC GCATTTCCAC GACAAGCACG TCTTCATCCA TGGCTGCGAC
CCGAAGGCCG ATTCCACGCG TTTGATCCTC GGCGGCCTGC CGCAAGCGAC CGTGATGGAC
ACGCTGCGCG TCGAGGGCGC CGAGAAGGTG ACGCTCGATA AGGTGGTGAA GACCGGCTTC
AAGGACATCC GCTGCGTCGA GTCCGGCGGT CCGGAGCCCG GCGTCGGCTG CGCCGGCCGC
GGCGTCATCA CCGCCATCGA CCTGATGGAA GAGAACGAAG CCTACACCGA AGACCTCGAT
TTCGTGTTCT TCGACGTGCT CGGCGACGTG GTGTGCGGCG GCTTCGCGAT GCCGATCCGC
GACGGCAAGG CGCAGGAAGT CTACATCGTC GCCTCCGGCG AAATGATGGC GATCTACGCC
GCCAACAACA TCTGCAAGGG TCTCACCAAA TACGCCAAGC AGAGCGGCGT CCGGCTTGGC
GGCATCATCT GCAACAGCCG CAACGTCGAT GGCGAAAAGG AATTTTTGGC CGAATTTACC
AAGGCGATCG GCAGCAAGAT GATCCATTTC GTGCCGCGCG ACAACATCGT GCAGAAGGCC
GAATTCAACA AGAAGACGGT CACCGAATTC CAGCCCGACG CCAACCAGGC GCATGAATAC
AAGGAGCTCG GCCGCAAGAT CATCGAGAAC ACCGATTTCG TGATCCCGAA GCCGATGGCG
ATGGACGAAC TCGAAGCCAT GGTCGTGAAA TACGGCCTGA TGGACTGA
 
Protein sequence
MTRKIAIYGK GGIGKSTTTQ NTAAALAHFH DKHVFIHGCD PKADSTRLIL GGLPQATVMD 
TLRVEGAEKV TLDKVVKTGF KDIRCVESGG PEPGVGCAGR GVITAIDLME ENEAYTEDLD
FVFFDVLGDV VCGGFAMPIR DGKAQEVYIV ASGEMMAIYA ANNICKGLTK YAKQSGVRLG
GIICNSRNVD GEKEFLAEFT KAIGSKMIHF VPRDNIVQKA EFNKKTVTEF QPDANQAHEY
KELGRKIIEN TDFVIPKPMA MDELEAMVVK YGLMD