Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_4684 |
Symbol | nifH |
ID | 3972390 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 5243123 |
End bp | 5243950 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637927796 |
Product | nitrogenase reductase |
Protein accession | YP_534525 |
Protein GI | 90426155 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1348] Nitrogenase subunit NifH (ATPase) |
TIGRFAM ID | [TIGR01287] nitrogenase iron protein |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACACGCA AGATTGCGAT CTACGGCAAG GGCGGCATTG GCAAATCGAC CACCACCCAG AACACCGCGG CGGCGCTGGC GCATTTCCAC GACAAGCACG TCTTCATCCA TGGCTGCGAC CCGAAGGCCG ATTCCACGCG TTTGATCCTC GGCGGCCTGC CGCAAGCGAC CGTGATGGAC ACGCTGCGCG TCGAGGGCGC CGAGAAGGTG ACGCTCGATA AGGTGGTGAA GACCGGCTTC AAGGACATCC GCTGCGTCGA GTCCGGCGGT CCGGAGCCCG GCGTCGGCTG CGCCGGCCGC GGCGTCATCA CCGCCATCGA CCTGATGGAA GAGAACGAAG CCTACACCGA AGACCTCGAT TTCGTGTTCT TCGACGTGCT CGGCGACGTG GTGTGCGGCG GCTTCGCGAT GCCGATCCGC GACGGCAAGG CGCAGGAAGT CTACATCGTC GCCTCCGGCG AAATGATGGC GATCTACGCC GCCAACAACA TCTGCAAGGG TCTCACCAAA TACGCCAAGC AGAGCGGCGT CCGGCTTGGC GGCATCATCT GCAACAGCCG CAACGTCGAT GGCGAAAAGG AATTTTTGGC CGAATTTACC AAGGCGATCG GCAGCAAGAT GATCCATTTC GTGCCGCGCG ACAACATCGT GCAGAAGGCC GAATTCAACA AGAAGACGGT CACCGAATTC CAGCCCGACG CCAACCAGGC GCATGAATAC AAGGAGCTCG GCCGCAAGAT CATCGAGAAC ACCGATTTCG TGATCCCGAA GCCGATGGCG ATGGACGAAC TCGAAGCCAT GGTCGTGAAA TACGGCCTGA TGGACTGA
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Protein sequence | MTRKIAIYGK GGIGKSTTTQ NTAAALAHFH DKHVFIHGCD PKADSTRLIL GGLPQATVMD TLRVEGAEKV TLDKVVKTGF KDIRCVESGG PEPGVGCAGR GVITAIDLME ENEAYTEDLD FVFFDVLGDV VCGGFAMPIR DGKAQEVYIV ASGEMMAIYA ANNICKGLTK YAKQSGVRLG GIICNSRNVD GEKEFLAEFT KAIGSKMIHF VPRDNIVQKA EFNKKTVTEF QPDANQAHEY KELGRKIIEN TDFVIPKPMA MDELEAMVVK YGLMD
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