| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4664 |
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| Symbol | |
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| ID | 3972350 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 5216824 |
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| End bp | 5219607 |
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| Gene Length | 2784 bp |
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| Protein Length | 927 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637927776 |
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| Product | ABC transporter related |
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| Protein accession | YP_534505 |
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| Protein GI | 90426135 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.113948 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGAGC CCGCGGGTCC GGCCGCGGCG CCCGTGGTGC GGCTGCAAGG CGTCGGGCTG
CGTTATGGCA AAGCTGTGGC ACTCGACGAC GTCACGCTGG ACCTGCCGGC GGGCTGCATG
ATCGGGCTGA TCGGCCCGGA CGGCGTCGGC AAGTCGAGTC TGCTGTCGCT GATCGCCGGC
GCCCGCGCCG TGCAGCAGGG TCATGTCGTG GTGTTCGGCG GCCAGATGTC GGACCCCACC
CATCGGCGGC TCGCCTGTCC GCGGATCGCC TACATGCCGC AGGGGCTCGG CAAGAATCTC
TACCCGACGC TGTCGGTGTT CGAGAACGTC GACTTCTTCG GCCGGCTGTT CGGCCAGGGC
GCGCGCGAGC GGGCGCGGCG GATCGGGCAG TTGTTGCAGG ACACCGGGCT GGCGCCGTTC
GCGAACCGCC CGGCGGGCAA ACTCTCCGGC GGCATGAAGC AGAAGCTCGG CCTGTGCTGC
GCGCTGATCC ACGATCCCGA TCTGTTGATT CTCGACGAGC CGACCACCGG CGTCGATCCT
TTGTCGCGGC GGCAGTTCTG GGAACTGATC GACGACATCC GCGGCCATCG TCCCGGCATG
AGCGTGATCG TCGCCACCGC CTATATGGAA GAGGCGGCGC GGTTCGACCA TCTGGTGGCG
ATGAATGCCG GCAAAGTGCT GGCGGCCGGC TCTCCCGCCG AACTGCTACA AAAGACCGGC
GCGGCGACGC TGGACGCCGC CTTCATCGCG CTGTTGCCGG AGGCCGAACG CCGCGGCTAT
CGCGAGGTGG TGATTCCGCC GCGCGTAGCT GCGGGCGTCG ACGACGTCGC CATCGAGGCC
GAGCATCTCA CCATGCGGTT CGACGATTTC ACCGCGGTCG ACGACGTCTC GTTCCGGATC
GGGCGCGGCG AAATCTTCGG CTTCCTCGGC TCCAACGGCT GCGGCAAGAC CACCACGATG
AAGATGCTGA CCGGATTGCT GGCGGCGAGC CAGGGCAAGG CCCGGCTGTT CGGCAACGAG
GTCGATCCCA ACGACATGGC GGTACGCCGC CGCGTCGGCT ACATGTCGCA GGCATTCTCG
CTGTATTCCG AACTCACCGT GCGGCAGAAT CTCGATCTGC ACGCCAGGCT GTTCAGCATG
GCGCCGGCGG CGATTCCGGC ACGGATTGCC GAGATGGAGC AGCGCTTCGA TCTCGCCGAG
GTGAGCGATC AACTGCCCGA TGCGTTGCCG CTCGGCATCC GGCAGCGGCT GTCGCTGGCG
GTGGCGATGA TCCACTCGCC GGATATTCTG ATTCTCGACG AGCCGACCTC CGGCGTCGAT
CCGGTGGCGC GCGACGGGTT CTGGCAAATT CTCTCCGACC TGTCGCGCAA GGACAACGTC
ACCATCTTCG TCTCGACCCA TTTCATGAAC GAGGCGGAGC GCTGCGACCG CATCTCGCTG
ATGCATGCCG GGAAGGTGTT GATCAGCGAC ACCCCGCGCG CCATCGTGCA GCGGCGCAAC
GCGCCCAATC TCGAAGACGC CTTCGTCGCC TATCTGGAGG ACGCGATCGG CCCAGCCTCT
GCGGATGCGG CGCCGGCGAT CGCGTCGCAA CCGGCGGTCA CGACGGCCAG CGCGCCAGCA
CTCGGCGACG TCGCGCCGCG CAAGCCGTCG CATCGCTGGT TCGATCCGCG GCGGATGTTC
GCCTATACGC GGCGCGAGGC GCTGGAGTTG CGCCGCGATC CGATCCGCGC CACCATGGCG
ATGCTCGGCA GCGTGCTGCT GATGTTCGTG CTCGGCTACG GCATCAATCT CGACGTCGAG
AAGCTGTCGT TCGCGGCGCT CGACCGCGAC GATACCACGA TCAGCCGCGA CTACGTCCTG
CAGATCGCCG GGTCGCGCTA TTTTCAGGAG CAACCGCCGA TCGCCGACTA CGCCGATCTC
GATCGTCGGA TGCGCGGCGG CGAATTGACC TTGGCGATCG AGATTCCGCC CGGCTTCGGC
CGTGACGTCG CCCGCGGCCG CAATGTCGAG ATCGGCGCCT GGATCGACGG CGCGATGCCG
GCGCGGGCGG AGACCGCGCG CGGCTATGTG CAGGCCATGC ATCTGAGCTG GCTGACGCAG
AAGGCGCGCG AACTGTACGG CGCCGCCGCG GTCGCCGGCA AGTTCCAGAT CGAGTTGCGC
TACCGCTACA ACCCCGACAT CAAGAGCCTG GTGGCGATGG CGCCAGCGGT GATTCCGCTG
CTGCTGCTGA TGATCCCGGC GATGCTGGCG GTGCTGAGCG TGGTGCGCGA AAAGGAGCTG
GGCTCGATCA TCAACTTCTA CGCCACCCCG ACCACGCGGC TGGAATTCCT GATCGGCAAG
CAAATTCCTT ACGTCGCGCT GGCGATGCTG AATTGCGTGC TGCTGACCGC CTTTGCGATT
TTCGTGTTTC AGGTGCCGTT CACCGGCAGC TTCCTCACTT TGGCCTGCGG CACCTTCCTT
TACGTCGTGA TCGCCACCGC GATCGGGCTG TTGCTGTCGA CCTTCATGAG CAGCCAGATC
GCCGCCATTT TCGGTACCGC GCTGATCACC TTGATCCCCG CGATCCAGTT CTCCGGATTG
ATCGACCCGG TGTCGTCGCT GCAGGGCTTC GGCGCTCTGA TCGGCCGGAT CTATCCCACC
ACCTATTTCG TCAACATCAC CCGCGGCACC TTCTCCAAGG GCCTCGACTT CGTCGAGCTG
TGGAATTCGT TCGTGCCGTT GCTGATCGCG GTGCCGCTAT TGCTCGGGCT CGGCGCGGCT
CTTCTCAAGA AACAGGCGAA CTGA
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| Protein sequence | MSEPAGPAAA PVVRLQGVGL RYGKAVALDD VTLDLPAGCM IGLIGPDGVG KSSLLSLIAG
ARAVQQGHVV VFGGQMSDPT HRRLACPRIA YMPQGLGKNL YPTLSVFENV DFFGRLFGQG
ARERARRIGQ LLQDTGLAPF ANRPAGKLSG GMKQKLGLCC ALIHDPDLLI LDEPTTGVDP
LSRRQFWELI DDIRGHRPGM SVIVATAYME EAARFDHLVA MNAGKVLAAG SPAELLQKTG
AATLDAAFIA LLPEAERRGY REVVIPPRVA AGVDDVAIEA EHLTMRFDDF TAVDDVSFRI
GRGEIFGFLG SNGCGKTTTM KMLTGLLAAS QGKARLFGNE VDPNDMAVRR RVGYMSQAFS
LYSELTVRQN LDLHARLFSM APAAIPARIA EMEQRFDLAE VSDQLPDALP LGIRQRLSLA
VAMIHSPDIL ILDEPTSGVD PVARDGFWQI LSDLSRKDNV TIFVSTHFMN EAERCDRISL
MHAGKVLISD TPRAIVQRRN APNLEDAFVA YLEDAIGPAS ADAAPAIASQ PAVTTASAPA
LGDVAPRKPS HRWFDPRRMF AYTRREALEL RRDPIRATMA MLGSVLLMFV LGYGINLDVE
KLSFAALDRD DTTISRDYVL QIAGSRYFQE QPPIADYADL DRRMRGGELT LAIEIPPGFG
RDVARGRNVE IGAWIDGAMP ARAETARGYV QAMHLSWLTQ KARELYGAAA VAGKFQIELR
YRYNPDIKSL VAMAPAVIPL LLLMIPAMLA VLSVVREKEL GSIINFYATP TTRLEFLIGK
QIPYVALAML NCVLLTAFAI FVFQVPFTGS FLTLACGTFL YVVIATAIGL LLSTFMSSQI
AAIFGTALIT LIPAIQFSGL IDPVSSLQGF GALIGRIYPT TYFVNITRGT FSKGLDFVEL
WNSFVPLLIA VPLLLGLGAA LLKKQAN
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