| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4657 |
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| Symbol | |
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| ID | 3972343 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 5208027 |
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| End bp | 5211185 |
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| Gene Length | 3159 bp |
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| Protein Length | 1052 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637927769 |
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| Product | heavy metal efflux pump CzcA |
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| Protein accession | YP_534498 |
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| Protein GI | 90426128 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3696] Putative silver efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.306321 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGCCC GTCTGATCGC CTGGTCGGCG CGGAACTTGT TGCTGGTGCT GTTCGGGGCC
GGTTTCGCCG CCGCTGCCGG GCTCTATGCG CTGGTGCATC TGCCGCTCGA TGCCATTCCG
GATCTCTCCG ATACCCAAGT CATCGTCTAC ACCGAATATT CCGGCCAGGC GCCGCAGGTG
ATCGAGGATC AGGTCACCTA TCCGCTCACC ACCGCGATGC TGACGGTGCC GAAATCCAAG
GTGGTGCGCG GCTTCTCGTT CTTCGGCGTG TCGTTCGTCT ATGTGATCTT CGAAGACGGC
ACCGACATCT ATTGGGCGCG CTCGCGGGTG CTGGAATTCC TCAACGGCGC CGCCTCGCGG
CTGCCGGCCG GCGTCACCCC GACCATCGGC CCGGACGCCA CCGGGGTCGG CTGGGTCTAT
CAATATGCGG TGATGTCGAA GGAGTTGAAC CTCGCCGACA CCCGCACGCT GCAGGACTGG
AATCTGAAAT TCGCGCTGGC CAAGGCCGAA GGCGTCGCCG AGGTCGCGAG CGTCGGCGGC
TTCGTCCGGC AGTATAACGT CGTTCTTGAT CCGCAGCGGA TGCGCGACCT CGGCATTCCG
ATGCAGAAGC TGCGCGACGC GATCCGCGCC AGCAACGCCG ACGTCGGCGG CCGCACCGTC
GAACTCTCGG AGTTCGAATA TGTCGTGCGC GGCAAGGGCT ATCTGAAGAA CATCAACGAC
CTCGGCAATG TGGTGCTGAA AAGTGCCGGC GGCACGCCGG TGCTGCTGCG CGACGTCGCC
CGCGTCGAGT TAGGCCCCGA CGAGCGCCGC GGCCTCACCG AATTGAACGG CGAGGGCGAG
GTGGCGAGCG GCATCGTGCT GCAGCGCTTC GGAGTCAACG CGCTCGACGT CATCGACAAC
GTCAAGCAGC GCTTCAAGGA GATCGCCTCA AGCTTGCCGG CCTCGGTCGA CATCGTCGCG
GTCTATGACC GCTCCAACCT GATCAAGGCC GCGATCGCCA CGCTGAAGCA CACGCTGATC
GAAGAAAGCA TCGTGGTGGC GCTGGTTTGC ATCGTGTTCC TGCTGCATGT GCGCAGCGCC
TTGGTGGCGA TCATCATGCT GCCGGTCGGC ATCCTGATGG CGTTCGCCAC CATGAAGCTC
TTAGGCCTCG GCGCCAACAT CATGAGTCTG GGCGGCATCG CCATCGCCAT CGGCGCGATG
ATCGACGCTG CGATCGTGAT GATCGAGAAC GCCCACAAGC ATCTGGAGCG CGCGCCGCCC
GACAAACCGC GCATCGAGGT GCTGATCGAG GCCGCGGCCG AGGTCGGGCC GGCGCTGTTC
TTTAGTCTCC TGATCATCAC CGTGTCGTTC ATGCCGATCT TCACGCTGGA ATCGCAGGAA
GGCCGGCTGT TCAGCCCGCT GGCTTTTACC AAGACCTTCT CGATGGCGGC GGCGGCGATC
TTGTCGGTGA CGCTGGTGCC GGCCTTGATG GTGCTGTGCG TGCGCGGCAA AATCATTCCG
GAGCACAAGA ACCCGATCAA CCGGCTGCTG ATCTGGATCT ATCGCCCGGC GATCAAGGCC
GTGCTCAAGG CCAAGGTGCT GGTGATCGTT TTGGCGCTTG CGGTGCTGGC GGTGACGGTG
TGGCCGGCGC GGCAGCTCGG CACCGAATTC ATGCCGGCAC TGGACGAGGG CACGCTGCTG
TACATGCCGA CCACGCTGCC GGGGATTTCC GTCACCAAGG CGGCCGAGCT GTTGCAGACC
CAGGACAAGA TCATCCGCTC GTTCCAGGAA GTCGCGTCGG TCTACGGCAA GGCCGGCCGC
GCCTCGACCG CCACCGATCC GGCGCCGCTG GAGATGTTCG AGACCATCAT CAACCTGAAA
CCCAAGGAGC AATGGCGCCC CGGCGTGACG CTCGACAGCC TGACCGCGGA GATGGACCGC
GCGCTGCAGT TTCCCGGCGT TTCCAACGCC TGGACCATGC CGATCAAGTC GCGGATCGAC
ATGCTGTCGA CCGGGATCCG CACCCCGATC GGCGTCAAGG TGATGGGCAG CGATCTGGTC
GAAATCGACA AGCTCGCCAA GCAGATCGAG CAGGTGCTCA AAACCGTGCC CGGCACCTCG
TCGGCCTATG CCGAGCGTGC GCTTGGCGGC TACTATCTCG ACGTGGTGCC GGATCGCGCG
GCGCTGGCGC GTTACGGCAT TGCGGTGCAG GACGTGCAGG ACGTCATCGC CACCGCGCTC
GGCGGCCAGA CCGTGACCAC CACGGTGGAA GGTCGCCAGC GTTTCAGCGT CAACATGCGC
TATCCGCGCG ACCTGCGTAG TAGCGCCCAG GCCATCGGCA GCGACGTGCT GGTGGCGATG
CCGGCCGGCG GCGCGGTGCC GCTCGGCGAG ATCGCCAGCA TCACGCCGTC GCGCGGCCCG
ACCGCGATCC GCACCGAGAA CGGCCAGCTC GCGGTCTATA TCTATGTCGA CATCCGCGAC
CGCGACCTCG GCGGCTATGT CGCCGACGCT AAGGCCGCGG TGCAGGCCTC GATCGCGTTT
CCGGCCGGCA CCTATGTGAT GTGGAGCGGG CAATACGAAT ATCTCGAACG CGCCGCGGCG
CGCTTGAAGG TCGTGGTGCC GGTGACGCTG ACCATCATCT TCCTGCTGCT GTATCTCAAC
TTCCGGGCGA TTTCCGACAC CCTGATCGTG ATGGCGTCGC TGCCGTTCGC ATTGGTCGGC
GGGATCTGGC TGATGTGGGC GCTCGGCTTC AACCTCTCGG TGGCGGTGGT GGTCGGCTTC
ATCGCGCTGG CCGGGGTCGC GGCCGAAACC GGCGTGGTGA TGCTGATCTA TCTCAATCAC
GCGCTGGCCG AGATCACCGC GCAGCGCGCC GCGGAGGGAA CGGCGCTGAG CCGACAGGAT
CTCACCGACG CCATCATGAA GGGGGCGGTA GAGCGGGTGC GGCCGAAAAT GATGACGGTG
GTGGCGATCA TGGCCGGCCT GCTGCCAATC CTGTGGAGCA CCGGCACCGG CTCGGAAATC
ATGCAGCGGA TCGCGGTGCC GATGATCGGC GGAATGATGT CCTCGACGCT GCTGACGCTG
ATCGTGATTC CCGCGATCTA CGGACTGATC AAAGGCGCCC GGTTGCACCA CGCCGAGGAT
GCGACCAAAC AGCGCACAGC GGCGGAACTA CGCGCCTGA
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| Protein sequence | MIARLIAWSA RNLLLVLFGA GFAAAAGLYA LVHLPLDAIP DLSDTQVIVY TEYSGQAPQV
IEDQVTYPLT TAMLTVPKSK VVRGFSFFGV SFVYVIFEDG TDIYWARSRV LEFLNGAASR
LPAGVTPTIG PDATGVGWVY QYAVMSKELN LADTRTLQDW NLKFALAKAE GVAEVASVGG
FVRQYNVVLD PQRMRDLGIP MQKLRDAIRA SNADVGGRTV ELSEFEYVVR GKGYLKNIND
LGNVVLKSAG GTPVLLRDVA RVELGPDERR GLTELNGEGE VASGIVLQRF GVNALDVIDN
VKQRFKEIAS SLPASVDIVA VYDRSNLIKA AIATLKHTLI EESIVVALVC IVFLLHVRSA
LVAIIMLPVG ILMAFATMKL LGLGANIMSL GGIAIAIGAM IDAAIVMIEN AHKHLERAPP
DKPRIEVLIE AAAEVGPALF FSLLIITVSF MPIFTLESQE GRLFSPLAFT KTFSMAAAAI
LSVTLVPALM VLCVRGKIIP EHKNPINRLL IWIYRPAIKA VLKAKVLVIV LALAVLAVTV
WPARQLGTEF MPALDEGTLL YMPTTLPGIS VTKAAELLQT QDKIIRSFQE VASVYGKAGR
ASTATDPAPL EMFETIINLK PKEQWRPGVT LDSLTAEMDR ALQFPGVSNA WTMPIKSRID
MLSTGIRTPI GVKVMGSDLV EIDKLAKQIE QVLKTVPGTS SAYAERALGG YYLDVVPDRA
ALARYGIAVQ DVQDVIATAL GGQTVTTTVE GRQRFSVNMR YPRDLRSSAQ AIGSDVLVAM
PAGGAVPLGE IASITPSRGP TAIRTENGQL AVYIYVDIRD RDLGGYVADA KAAVQASIAF
PAGTYVMWSG QYEYLERAAA RLKVVVPVTL TIIFLLLYLN FRAISDTLIV MASLPFALVG
GIWLMWALGF NLSVAVVVGF IALAGVAAET GVVMLIYLNH ALAEITAQRA AEGTALSRQD
LTDAIMKGAV ERVRPKMMTV VAIMAGLLPI LWSTGTGSEI MQRIAVPMIG GMMSSTLLTL
IVIPAIYGLI KGARLHHAED ATKQRTAAEL RA
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