Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_4648 |
Symbol | |
ID | 3972237 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 5199030 |
End bp | 5199923 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637927760 |
Product | LysR family transcriptional regulator |
Protein accession | YP_534489 |
Protein GI | 90426119 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGATCGACA AGCTCGAATT GTTATTGGCG CTGGCCAAGG AGCGCCATTT CGGCCGGGCC GCGGAATCCT GCGGCGTCAC CCAACCGACG ATGTCGACCA GCCTGAAGCA GCTCGAAGAG ATTCTCGGCG TGATGCTGGT GCAGCGCGGC TCACGCTTTC AGGGCTTCAC TCCAGAAGGC GAGCGCACGC TGGATTGGGC GCGGCGCATC GTCGGCGACG TCCGCTCGAT GCGCCAGGAG ATCAAGACGC TGAAGGACGG GCTGTCCGGC GAAATCCGCA TCGCCGCGAT CCCGACCGTG CTCGGCATGG TGGCGGCTTT GACCACGCCG TTTCGCGCCC GCCATCCCGA CGTCAAGTTC CGCATCGTGT CCTGCACCTC GGCGGAAGTG CTCGGGCTGT TGGAAAATCT CGAGGTCGAC GCCGGCCTGA CCTACATCGA AAACGAGCCG CTCGGCAAAG TGCGCTCGGT CCCGCTGTAT CATGAGAGCT ACCGGTTGCT GACCTCGCCG GATGGTTTGT TCGGTGACCG CGACGAAGTG ACTTGGCGTG AGGTCGGCCA AGTGCCGCTC TGCCTGCTGA CGCCGGATAT GCAGAACCGC CGCATCATCG ATCGCGCGTT GAAGGCGGTG GGCACCGAGG CCAAGCCGAC GCTGACCTCG AATTCGATCA TCGTGCTCTA TACCCATGTC AAGACCGGCC GCTGGGCCAG CGTGATGCCG GCAAAACTGG CGGAAACGCT GGGGTTTTCC GATGCGGTGC GGAGCATCCC GATCGTCGAT CCGGTGGTGA GCTACTCGAT CGGCCTAGTG GTTCCGCCGC GCGAGCCGCT GACCCCGCTG ATCGCCGCGC TGGTGCAGGT CGCCCGCGAA GTGGCGCCGA CGCTGGAGAG CTGA
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Protein sequence | MIDKLELLLA LAKERHFGRA AESCGVTQPT MSTSLKQLEE ILGVMLVQRG SRFQGFTPEG ERTLDWARRI VGDVRSMRQE IKTLKDGLSG EIRIAAIPTV LGMVAALTTP FRARHPDVKF RIVSCTSAEV LGLLENLEVD AGLTYIENEP LGKVRSVPLY HESYRLLTSP DGLFGDRDEV TWREVGQVPL CLLTPDMQNR RIIDRALKAV GTEAKPTLTS NSIIVLYTHV KTGRWASVMP AKLAETLGFS DAVRSIPIVD PVVSYSIGLV VPPREPLTPL IAALVQVARE VAPTLES
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