Gene RPC_4648 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_4648 
Symbol 
ID3972237 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp5199030 
End bp5199923 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content65% 
IMG OID637927760 
ProductLysR family transcriptional regulator 
Protein accessionYP_534489 
Protein GI90426119 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGATCGACA AGCTCGAATT GTTATTGGCG CTGGCCAAGG AGCGCCATTT CGGCCGGGCC 
GCGGAATCCT GCGGCGTCAC CCAACCGACG ATGTCGACCA GCCTGAAGCA GCTCGAAGAG
ATTCTCGGCG TGATGCTGGT GCAGCGCGGC TCACGCTTTC AGGGCTTCAC TCCAGAAGGC
GAGCGCACGC TGGATTGGGC GCGGCGCATC GTCGGCGACG TCCGCTCGAT GCGCCAGGAG
ATCAAGACGC TGAAGGACGG GCTGTCCGGC GAAATCCGCA TCGCCGCGAT CCCGACCGTG
CTCGGCATGG TGGCGGCTTT GACCACGCCG TTTCGCGCCC GCCATCCCGA CGTCAAGTTC
CGCATCGTGT CCTGCACCTC GGCGGAAGTG CTCGGGCTGT TGGAAAATCT CGAGGTCGAC
GCCGGCCTGA CCTACATCGA AAACGAGCCG CTCGGCAAAG TGCGCTCGGT CCCGCTGTAT
CATGAGAGCT ACCGGTTGCT GACCTCGCCG GATGGTTTGT TCGGTGACCG CGACGAAGTG
ACTTGGCGTG AGGTCGGCCA AGTGCCGCTC TGCCTGCTGA CGCCGGATAT GCAGAACCGC
CGCATCATCG ATCGCGCGTT GAAGGCGGTG GGCACCGAGG CCAAGCCGAC GCTGACCTCG
AATTCGATCA TCGTGCTCTA TACCCATGTC AAGACCGGCC GCTGGGCCAG CGTGATGCCG
GCAAAACTGG CGGAAACGCT GGGGTTTTCC GATGCGGTGC GGAGCATCCC GATCGTCGAT
CCGGTGGTGA GCTACTCGAT CGGCCTAGTG GTTCCGCCGC GCGAGCCGCT GACCCCGCTG
ATCGCCGCGC TGGTGCAGGT CGCCCGCGAA GTGGCGCCGA CGCTGGAGAG CTGA
 
Protein sequence
MIDKLELLLA LAKERHFGRA AESCGVTQPT MSTSLKQLEE ILGVMLVQRG SRFQGFTPEG 
ERTLDWARRI VGDVRSMRQE IKTLKDGLSG EIRIAAIPTV LGMVAALTTP FRARHPDVKF
RIVSCTSAEV LGLLENLEVD AGLTYIENEP LGKVRSVPLY HESYRLLTSP DGLFGDRDEV
TWREVGQVPL CLLTPDMQNR RIIDRALKAV GTEAKPTLTS NSIIVLYTHV KTGRWASVMP
AKLAETLGFS DAVRSIPIVD PVVSYSIGLV VPPREPLTPL IAALVQVARE VAPTLES