| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4646 |
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| Symbol | |
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| ID | 3972235 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 5196698 |
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| End bp | 5198254 |
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| Gene Length | 1557 bp |
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| Protein Length | 518 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637927758 |
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| Product | NADH dehydrogenase (quinone) |
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| Protein accession | YP_534487 |
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| Protein GI | 90426117 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1894] NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.408864 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCTCA AGATCTTCAT TCCGCGCGAT GCCGGCGCGA TTGCGGTCGG CGCCGACGAG
GTCGCGCTGG AGCTGGAACT CTGCGCCCGC AAGCGCGGCG TCAGCCTTGA GGTGGTGCGT
ACCGGATCGC GCGGGCTGTA TTGGCTGGAG CCGATGCTGG AGGTTTCAAC CGGCGCCGGA
CGGATCGCAT TCGGGCCGCT GACGCCGGGC GACGTGGGCT CGGTGCTCGA CGCCATCGCG
GCGGATGGGC CGCATCCGCT GCGGCTCGGC CTCACCGAGC AGATCCCCTG GCTGAAGCGG
CAGACCCGGC TGACGTTTGC GCGCTGCGGC GTGATCGATC CGCGCTCGGT CGAGGATTAT
CGCGCCCATG GCGGCTATGA GGGGCTGGAG CGGGCGCTGG CGCTGACCTC CGAGGCGATC
ATCGACGACG TCATCAAGTC CGGGCTGCGC GGCCGCGGCG GCGCCGGTTT CCCGACCGGC
ATCAAGTGGC GCACGGTCGC GCAAGCCGCC GCTGCGCAGA AGTATATCTG CTGCAATGCC
GACGAGGGCG ATAGCGGCAC CTTTGCCGAC CGCATGATCA TGGAAGGCGA TCCCTATATG
GTGATCGAGG GCATGACCAT CGCCGGCATC GCGGTGGGTG CCACCCGCGG CTACATCTAC
ATCCGCTCGG AATATCCGCA TGCGGTGGAG GCGATCAACG CGGCGATCGC CGGCGCGCGG
CGCGCCGGCT ATCTCGGCCC CGGCATCGGC CGCTCGCGGC ACGATTTCGA CATCGAGGTG
CGGGTCGGCG CGGGGGCTTA CATCTGCGGC GAAGAGACCG CGATGCTGGA GAGCATCGAG
GGCAAGCGCG GCGTGGTGCG CGCCAAGCCG CCGCTGCCGG CGCATAAGGG GCTGTTCGGC
CAGCCCACCG TGATCAACAA CGTGCTGAGC TTCGCGGCAA TTCCCTTCAT CCTCGCCGGC
GGCGCGCAGG CCTATGCGGA TTGCGGCATG GGCCGTTCGC GCGGCACCAA GCCGATCCAG
CTCGGCGGCA ATATCAAGCA CGGCGGGCTG TTCGAGGTGG CGTTCGGCAT CACGCTCGGC
GAACTGGTCG ACGACATCGG CGGCGGCACC GCCTCGGGGC GGCCGGTGCG CGCGGTGCAG
GTCGGCGGCC CGCTCGGCGC TTACTTCCCG CGCGAACTGT TCGACACGCC GTTCGATTAC
GAAGCCTTCG CGGCGCGCAG CGGTTTGGTC GGCCATGGCG GCGTGGTGGT GTTCGACGAC
ACCGTCGATA TGGCCAAGCA GGCGCGTTTT GCGATGCAGT TTTGCGCCAT CGAGTCCTGC
GGCAAGTGCA CGCCGTGCCG GATCGGCTCG CAGCGCGGCG TCGAGACCAT CGACAAGATC
ATCAATGGCG ATCGCGCCCC GCAGAACATC GCGCTGTTGG AAGACCTCTG CCAGACCATG
AAGCTCGGCT CGCTGTGTGC GCTCGGCGGC TTCGTGCCGT ACCCGGTGCT GAGCGCGCTG
ACGCATTTCC CGGAAGACTT TGGACTAGCG CCGCCGCGTC TGCAGGCTGC GGAATAG
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| Protein sequence | MKLKIFIPRD AGAIAVGADE VALELELCAR KRGVSLEVVR TGSRGLYWLE PMLEVSTGAG
RIAFGPLTPG DVGSVLDAIA ADGPHPLRLG LTEQIPWLKR QTRLTFARCG VIDPRSVEDY
RAHGGYEGLE RALALTSEAI IDDVIKSGLR GRGGAGFPTG IKWRTVAQAA AAQKYICCNA
DEGDSGTFAD RMIMEGDPYM VIEGMTIAGI AVGATRGYIY IRSEYPHAVE AINAAIAGAR
RAGYLGPGIG RSRHDFDIEV RVGAGAYICG EETAMLESIE GKRGVVRAKP PLPAHKGLFG
QPTVINNVLS FAAIPFILAG GAQAYADCGM GRSRGTKPIQ LGGNIKHGGL FEVAFGITLG
ELVDDIGGGT ASGRPVRAVQ VGGPLGAYFP RELFDTPFDY EAFAARSGLV GHGGVVVFDD
TVDMAKQARF AMQFCAIESC GKCTPCRIGS QRGVETIDKI INGDRAPQNI ALLEDLCQTM
KLGSLCALGG FVPYPVLSAL THFPEDFGLA PPRLQAAE
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