| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4640 |
|---|
| Symbol | |
|---|
| ID | 3972229 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | + |
|---|
| Start bp | 5187776 |
|---|
| End bp | 5190046 |
|---|
| Gene Length | 2271 bp |
|---|
| Protein Length | 756 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637927752 |
|---|
| Product | xanthine dehydrogenase |
|---|
| Protein accession | YP_534481 |
|---|
| Protein GI | 90426111 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1529] Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCGCTGG CGCCGGACAG TTGGCTTCCC GGCGGCGAGC CCGACCCGCT GATCCGCCAC
CAGCACGGCC ATATCGGCAA GCCGCTGTCG CGCATCGACG GGCCTCTCAA GGTCGCCGGG
AAAGCGCGCT TCGCAGCCGA GTTTCCGATC GACGGTATGG TTTACGCGGC GCTCGTTCAT
TCCAGCATCG CCAAGGGCAA GATTGCCGGA ATCGATACGA CCGACGCCGA AGCCGCGACC
GGTGTGGTCG CGGTGATGAC CCACGAGAAT GCGCCGCGGC TCAAGCCGCC GCCGGTGTTC
ATGTCGGCGG CCAAAGCCGC CGGCGGCGAC GACTGGCCGG TGATGCAGGA TGCCACCGTG
CGCTGGAACG GCGAGCCGGT CGCGGTGGTC CTCGCCGAGA CCCAGGAGCA GGCAGACCAC
GCCGCGTCGC TGGTCGCGGT GCGCTACGAG CAAGCGGAGG CGCTGACCTC GTTCGCCGCG
GCGATCGCCA AGGGAACGAA GTCGGCGCAG TTCATGGGCG GACCGCTGCA CAACGAGAAG
GGCGATGCCG AAGCGGCGCT GGCTGCCGCT GCGACCAGCA TCGACTCCCT CTATACGACC
CCGCGGCACA ACCATAATGC GATCGAGCTC CACGGTGTCA CCGTCGCGTG GCAAGGCGAC
ACGCTGCGGA TCCACGACGC TTCGCAGCTC GTCGCGCACA CCGCCTGGTC GATCGCGCAG
ATGTTCGGGC TGAACGAGCA GCAGGTGATC GTTACCTCGC CGTTCGTCGG CGGCGGCTTC
GGCGGCAAGT GTCTGTGGCA ACATCAGGTG CTCGCCGCGG CGGCCGCCAA GCTGGTGGGC
CGACCGGTAC GGCTGGTGCT GTCGCGCGAG GGTGTCTACC GTCTGGTCGG CGGCCGCAGC
CTCACCGAAC AGCGGGTGGC GCTCGGGGCA GCAGCCGACG GCAGGCTGGC CGCGCTAATT
CACAGCGGGA CGACGGCCAA GACCGACGGC AATCTGATGC CCGAGCCGTT CATCCTGCCG
ACACGCAGCG CCTACGCCTC CGAGACCTTG CTGCTCGACG TGCAGGCGGT CGAACTCGAC
ATGCTCGCCA ACACCTTCAT GCGCGCGCCC GGTGAAGCGG TCGGCACCTT TGCGCTGGAA
TGCGCCATCG ACGAACTCGC CGAGCAACTG GGCATCGATC CGATCGAGTT GCGTCTGCTC
AACGAGCCGG AGAACGATCC TTTGTCGGGT CTGCCGTTCT CCGCTCGCCA TATCGATCAA
GCATGGCGCG CCGGTGCCGC GAAATTCGGC TGGGACCGAC GCAAGGCGAC GCCACGCGCC
CGACACGACG GCGAATGGCT GGTCGGCCTT GGCTGTGCCA CCGCGACTTA TCCATACTAC
CGCATGCCCG GCGGCGCAGC GCGGATCACG CTGAGCGCGG ACGGCAAGGC GACGATCGAC
ATTGCCGCGC ATGAAATGGG TATGGGCACC GCGACGGCGC AAACTCAGAT TTCCGCCGAG
CGGCTCGGGT TGCCGCTGGA TGCGATCAGC TTCAACTATG GCGATTCCAC CTTGCCCGGC
GTGGTGCTTG CCGGCGGGTC GCAGCAGACC GCCGCGATCG GCGCCTCGGT GATCGCGGCG
CATCGCGCGC TGGTCGCGGA ATTGCTGAAG CTTGCCGGCA ACGACAGTCC GCTGGCCGGC
CTCAAGCCCG ACGAGATCGC CAGCCGCGAC GGCGGGCTGT GCAAGCTTGA CGAGCCGGAC
CGGTTCGAAA GCTACGTGTC GATCCTCGGC CGCGCCCACC GCGACGAGGT TCGCGTCGAG
GCCACGCCGC CGGATCCGTT GGAGACGATG CATTGGTCGA TGCACAGCCA TGGGGCGATG
TTCGCGGAAG TTCGCGTCAG CGCGATCACC GGCGAGATCC GGGTCAGCCG GTTTCTGGGA
TCGTTCGACT GCGGGCGGAT CATGAACGCC AAGACCGCGG CCAGCCAGTT TCGCGGCGGC
ATCATCATGG GGCTCGGGCT GGCGCTGATG GAGGAGACGC AGTTCGACGA GCGCAACGGG
CGAATTATGA ATCCGAGCCT CGCGGAGTAT CACCTCCCGG TGCACATGGA TGTGCCGCAG
ATCGAGGTGA TGTGGACCGA CATTCCCGAT CCGCACACCC CGATGGGCGC GCGCGGCGTC
GGCGAAATCG GGATCACCGG CACAGCTGCT GCCGTCGCAA ATGCCGTGTA TAATGCGACC
GGAACACGGG TCCGAGATCT GCCGATTACG CTCGACAAGC TTTTGGCATG A
|
|---|
| Protein sequence | MALAPDSWLP GGEPDPLIRH QHGHIGKPLS RIDGPLKVAG KARFAAEFPI DGMVYAALVH
SSIAKGKIAG IDTTDAEAAT GVVAVMTHEN APRLKPPPVF MSAAKAAGGD DWPVMQDATV
RWNGEPVAVV LAETQEQADH AASLVAVRYE QAEALTSFAA AIAKGTKSAQ FMGGPLHNEK
GDAEAALAAA ATSIDSLYTT PRHNHNAIEL HGVTVAWQGD TLRIHDASQL VAHTAWSIAQ
MFGLNEQQVI VTSPFVGGGF GGKCLWQHQV LAAAAAKLVG RPVRLVLSRE GVYRLVGGRS
LTEQRVALGA AADGRLAALI HSGTTAKTDG NLMPEPFILP TRSAYASETL LLDVQAVELD
MLANTFMRAP GEAVGTFALE CAIDELAEQL GIDPIELRLL NEPENDPLSG LPFSARHIDQ
AWRAGAAKFG WDRRKATPRA RHDGEWLVGL GCATATYPYY RMPGGAARIT LSADGKATID
IAAHEMGMGT ATAQTQISAE RLGLPLDAIS FNYGDSTLPG VVLAGGSQQT AAIGASVIAA
HRALVAELLK LAGNDSPLAG LKPDEIASRD GGLCKLDEPD RFESYVSILG RAHRDEVRVE
ATPPDPLETM HWSMHSHGAM FAEVRVSAIT GEIRVSRFLG SFDCGRIMNA KTAASQFRGG
IIMGLGLALM EETQFDERNG RIMNPSLAEY HLPVHMDVPQ IEVMWTDIPD PHTPMGARGV
GEIGITGTAA AVANAVYNAT GTRVRDLPIT LDKLLA
|
|---|
| |