| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4634 |
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| Symbol | |
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| ID | 3972145 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 5178284 |
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| End bp | 5179294 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637927746 |
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| Product | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding |
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| Protein accession | YP_534475 |
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| Protein GI | 90426105 |
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| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.264682 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGTCG CGGTGTTCAA TACCAAGCCC TACGATCGGC GGTTTCTGAC CGCGGCCAAT
ACCAAGGACG GCGACAGGCA TGATCTGCAT TTCCTCGAGC CGCGCCTGGG GCCGGACACA
GCGCAGCTGA GCGGCCAGGC CGAGGCGATC TGCGCGTTCG TCAACGATGG GCTCGACCGA
TCCGTGCTGC GAATGCTGAA GGCCAACGGC GTGCGACTTG TGGCGTTGCG TTGCGCCGGC
TTCAACAATG TGGATCTGAT GGCCGCGCGC GATCTTGGAA TCGCGGTGGC GCGCGTGCCG
GCCTATTCGC CGGCAGCCGT GGCGGAGCAC ACGGTCGCGC TGATCCTGTC CCTCAACCGG
AAGATCCATC GCGCTTACGC GCGGGTCCGC GAAGGTAACT TCGCTCTGGA AGGATTGCTC
GGGTTCGATC TCAAAGGGCG TTGCATCGGA ATTGTCGGCA CCGGAAATAT CGGTCTGTCG
GTCGCCGGCA TCATGGCCGG ATTCGGCTGT CGCGTGCTGG GTTTTGATCC TCACCCCAAT
CCCGCCTTCG CGGCGCTCGG AGCACGCTAT GTCGGCCTGC AGGAGTTGCT GTCGCAGTCC
GACATCGTCA CGTTGCATTG CCCACTGACC CCGAACACCC ATCACGTGAT CAATGCGACG
GCGATCGCTG CGATGAAGCC GGGCGTGATG CTGATCAATA CCGGACGCGG CGCGCTCATC
GATACGCGGG ACGTGATCCA GGGATTGAAG AGCAAGACGA TCGGCTATTT GGGTCTCGAC
GTCTATGAGG AGGAAAGCGA GCTCTTCTTC GAGAACCTGT CCGGGCAGAT CATTCAAGAC
GATGATTTTG CCCGACTGCT GACGTTCCCC AACGTTCTGA TCACCGCTCA CCAAGCCTTC
TTCACGCAAG AGGCGTTGAC GGCCATCGCC GAGACCACCA TCCGCAATAT CTCGCAGTTC
GAATCGGCCG GCGAGGCGGC GCATCCGGTC GCCTTGGAAT GGCGCGGCTG A
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| Protein sequence | MKVAVFNTKP YDRRFLTAAN TKDGDRHDLH FLEPRLGPDT AQLSGQAEAI CAFVNDGLDR
SVLRMLKANG VRLVALRCAG FNNVDLMAAR DLGIAVARVP AYSPAAVAEH TVALILSLNR
KIHRAYARVR EGNFALEGLL GFDLKGRCIG IVGTGNIGLS VAGIMAGFGC RVLGFDPHPN
PAFAALGARY VGLQELLSQS DIVTLHCPLT PNTHHVINAT AIAAMKPGVM LINTGRGALI
DTRDVIQGLK SKTIGYLGLD VYEEESELFF ENLSGQIIQD DDFARLLTFP NVLITAHQAF
FTQEALTAIA ETTIRNISQF ESAGEAAHPV ALEWRG
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