| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4624 |
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| Symbol | |
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| ID | 3972134 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 5165247 |
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| End bp | 5166617 |
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| Gene Length | 1371 bp |
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| Protein Length | 456 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637927735 |
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| Product | agarase |
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| Protein accession | YP_534465 |
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| Protein GI | 90426095 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCTGTG AACAAGGAGA TAGATGGGTG CGACGAACCA AATGGGGCGG CCTTGCCGAT
GGCTGTTTCG AACCCAGCGG CTTCTTTCGG GTGGAGCAGG ACGATGGCGT ATTCTGGTTC
GTCGATCCCG ATGGCGGCCG GTTTCTGTCC AAGGGCGTCA ACAACGTCCA GTTCGCTCCG
GATCAGATTC GCGGCACCGA TCGGACGCCC TATGCCGAGG CCTGCCTGGC GAAATACGGC
AGCCGCAACG AATGGCGTCG CGCGGCGGCG GAGCGATTGA CCGGCTGGGA TTTCAACACG
CTGGGCTGCT GGTCGGATGA GATCGTCGCC GGCGCAGGCG CCTTGCCGCT GGCCACCGCG
CCGATCGTCG ACCTCGGCGC TTCGTTCTGG CTGCATCGTC ACGGCCAGCG CTTTCCCGAC
GTGTTCGACG CCGAATTCGA CAATCACATC CGGCAACGCG CCAAGGACCT GTGCACGCCG
CGCCGCAATG CTCCGGAATT GCTCGGCACC TTCATCGACA ACGAGCTGTA CTGGTCGCCT
GACTGGCGCG GCCACGACGA GTTGCTGACC ACGTTCTTGA ATTTTCCGCC CGGACGCGCC
GGCCGCGTCA CCGCGATCAC CGCGCTGCAG CAGCACTATG GCGAGTTCGC CCACTTCAAC
GTGATCTGGC ACACGCCGGT GCGGTCCTGG GAGGCACTGC ATGCGCTCGA GACCATCGCG
GCGCCGTTTG TGCGCGCGGC GCCGGGCGGC GATTATGCCG TGCTCGAAGC GGAGGCCAAC
CGCAACCCGC GGCGCGCGGC GTTCGCCGCC GATTGCGACG CCTTTGCCGC GGTGGTGGCC
GACCGCTATT TCGAACTCTG CACGGCGGCG ATCAAGGCCG CCGATCCCAA CCATCTGGTG
CTCGGCGCAA GGCTCGGCGC GCTGCCGCAC GACGGCGTGG TCGCCGCCGC CGGCCGCCAT
CTCGACGTGA TTTCGTTCAA TTGCTACGGC TTCGACCCAT CGGCCTTGCT CGACGCCTAT
GCGGTGACCG GCAAGCCCTG CCTGATCACG GAGTTTTCGT TTCGCGGCGA CGATGCAGGC
CTGCCGAACA GTTGCGGCGG CGGTCCGCGG GTCGCCACCC AGGCCGACCG CGCCCACGCC
TTCGAGCGCT ATGTCGCCGC GGCGCTGATC AAGCCGAATC TGGTCGGCTA CCACTGGTTC
GAGCATGCCG ATCAGCCGGC CGAAGGCCGC TTCGACGGCG AGGACTGCAA TTACGGCACG
GTGACGATCA AAGACGAGGT CTATCCGGAA CTCACGGCAT CGATGAGCCG GTTGAATGCG
GCGGCGGAGA GCATCCATCG CAAGGCCGTG GCGGCGCGAC CGGCGGCTTG A
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| Protein sequence | MRCEQGDRWV RRTKWGGLAD GCFEPSGFFR VEQDDGVFWF VDPDGGRFLS KGVNNVQFAP
DQIRGTDRTP YAEACLAKYG SRNEWRRAAA ERLTGWDFNT LGCWSDEIVA GAGALPLATA
PIVDLGASFW LHRHGQRFPD VFDAEFDNHI RQRAKDLCTP RRNAPELLGT FIDNELYWSP
DWRGHDELLT TFLNFPPGRA GRVTAITALQ QHYGEFAHFN VIWHTPVRSW EALHALETIA
APFVRAAPGG DYAVLEAEAN RNPRRAAFAA DCDAFAAVVA DRYFELCTAA IKAADPNHLV
LGARLGALPH DGVVAAAGRH LDVISFNCYG FDPSALLDAY AVTGKPCLIT EFSFRGDDAG
LPNSCGGGPR VATQADRAHA FERYVAAALI KPNLVGYHWF EHADQPAEGR FDGEDCNYGT
VTIKDEVYPE LTASMSRLNA AAESIHRKAV AARPAA
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