| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4621 |
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| Symbol | xseA |
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| ID | 3972131 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 5160828 |
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| End bp | 5162453 |
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| Gene Length | 1626 bp |
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| Protein Length | 541 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637927732 |
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| Product | exodeoxyribonuclease VII large subunit |
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| Protein accession | YP_534462 |
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| Protein GI | 90426092 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1570] Exonuclease VII, large subunit |
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| TIGRFAM ID | [TIGR00237] exodeoxyribonuclease VII, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCCAA CGACAGCCGC GCTGCCGAAC TCGCCGGAAT TCACCGTCAC CGAACTCTCC
TCCGCGCTGA AGCGGACGGT CGAGGACGCC TACGGTCATG TCCGGGTGCG CGGCGAGATT
TCCGGGTTTC GCGGCCCGCA TTCCTCCGGA CACTGCTATT TCGCGCTGAA GGATGAAGGC
GCCAAGATCG AGGCGGTGAT CTGGAAGGGC GTGCATGGCC GGATGCGTTT CAAGCCGCAG
GAAGGCCTCG AGGTCATCGC CACCGGCAAG CTGACCACCT ATCCCGGCTC GTCGAAATAT
CAGATCGTGA TCGAAGCCAT CGAGCCCGCC GGGATCGGCG CGCTGATGGC CTTGATGGAA
GAGCGCAAGC GCAAGCTCGG CGCCGAAGGG CTGTTCGACG AGGCCCGCAA GCAGCTGTTG
CCGTATCTGC CGGAGGTGAT CGGCGTCGTC ACCTCGCCGA CCGGCGCGGT GATCCGCGAC
ATTTTGCATC GGTTGCAGGA CCGCTTCCCG CGCCGCGTGC TGGTGTGGCC GGTCAAGGTG
CAGGGCGACG GCTCGGCCGA ACAAATCGCC GCCGCGATCC ACGGCTTCAA CGCGCTGCCG
GAAGGCGGAT CGATCCCGCG GCCCGATCTG TTGATCGTGG CGCGCGGCGG CGGCTCGCTG
GAGGATCTGT GGTCGTTCAA CGAGGAGATC GTGGTCCGCG CCGCCGCCGA CAGCATGATC
CCGCTGATTT CGGCTGTCGG CCACGAGACC GACATCACGC TGATCGATTT CGCCGCCGAC
AAGCGCGCGC CGACGCCGAC CGCGGCGGCC GAAATGGCGG TGCCGGTGCG CGCCGAATTG
TTCGTCGAGG TCGGCCAGCT CGGCCACCGC GCCATGCTTT GTTTCCAGCG CGGCCAGGAG
CGGCGCCGCA GCGAGCTGCG CGCCGCCACA AGGGCGCTGC CGTCGGCCGC GGCACTGCTG
GCCATTCCGC GACAGCGTCT TGATGGAGCG GCGGCGGCGC TGCCACGCGC GTTGCGCGCC
AACAGCCATG CGCATCACCG CCGCTTCGCA ACCGCCTGCG CCGGGCTGAC GCTGAAGGTG
TTGCGCGCCC AGGTCGCGCA CGCCACGCAG CGGCTCGCCG TCAATGGCGA ACGGCTGAAG
CATTGCGCGC GGGCCGGGCT GCGGCATCGC CGCGATCGGT TCGCGGCGCT CGATGCCCGC
TTCAAGGCGT CGAAGCTGGC CAATGTGCAG GCGCAGCGCA AAGCCTTGGC GCGCGACCGC
GAACGCACGC AGCGGCTCGC CGAGCGGGCA CGCCGCGCGC TGCTGATTGC GTTGCAGCGC
CAGCAGGCCC GGGTGGCGTC GTGCGGACAG TTGCTTGGTG CGCTGTCGTA TCGCGGCGTG
CTGGCACGCG GCTTCGCGCT GGTGCGCGAT GCGCAGGGGC TGGCGGTGCA TGCCGCGGCG
GCAATCGATC CCGGCGCGAG GCTCAGCCTG GAGTTTGCCG ACGGCCGGAT CGGCGCCACC
GCGGATGGCG AGAGCGCGGC TGCGCCGCGT AGTAAGCCCG CGGCAAAGCC GGCGACGGCG
AAGCCGGCCA GCACGACGAC GGCGAAGCGA GTGTCGAAAT CGGTCGATCA GGGCAGTTTG
TTTTAG
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| Protein sequence | MPPTTAALPN SPEFTVTELS SALKRTVEDA YGHVRVRGEI SGFRGPHSSG HCYFALKDEG
AKIEAVIWKG VHGRMRFKPQ EGLEVIATGK LTTYPGSSKY QIVIEAIEPA GIGALMALME
ERKRKLGAEG LFDEARKQLL PYLPEVIGVV TSPTGAVIRD ILHRLQDRFP RRVLVWPVKV
QGDGSAEQIA AAIHGFNALP EGGSIPRPDL LIVARGGGSL EDLWSFNEEI VVRAAADSMI
PLISAVGHET DITLIDFAAD KRAPTPTAAA EMAVPVRAEL FVEVGQLGHR AMLCFQRGQE
RRRSELRAAT RALPSAAALL AIPRQRLDGA AAALPRALRA NSHAHHRRFA TACAGLTLKV
LRAQVAHATQ RLAVNGERLK HCARAGLRHR RDRFAALDAR FKASKLANVQ AQRKALARDR
ERTQRLAERA RRALLIALQR QQARVASCGQ LLGALSYRGV LARGFALVRD AQGLAVHAAA
AIDPGARLSL EFADGRIGAT ADGESAAAPR SKPAAKPATA KPASTTTAKR VSKSVDQGSL
F
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