Gene RPC_4604 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_4604 
Symbol 
ID3972095 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp5139905 
End bp5140543 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content60% 
IMG OID637927715 
ProductCheC, inhibitor of MCP methylation 
Protein accessionYP_534445 
Protein GI90426075 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG1776] Chemotaxis protein CheC, inhibitor of MCP methylation 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.517072 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCATCG AACGCGGCGA ACTTACCGAC ATCGAACAAG ACGCGCTCGC GGAGATCGCC 
AATCTCGGTG TCAGCCGTGC CGCCGCGAGT CTCCGCCAGA TGGTTGGCGA ACAGGTGCTG
CTGTCAGTGC CGGCGGTCCG CATCGTCGCG CGGGACATTG CCGCCCAGCT GGTCGAAGGT
GACAACGCCC AGCAGTTGGT GGCGGTGAAG CAGTCGTTCG ACGGACCGTT CGCCGGTAAA
GCGCTACTGA TCTTTCCCCA GGCGCAGAGC CTGGAACTGG TGCGCTCGAT CGTCGGTCAT
GAGCATAGCC TGGAGGACGT GATCGACCTC GAGCAGGAAG CGCTCGCCGA AACCGGAAAT
GTGATCCTCA ATGCCTGTCT GGCGACCATC GCCAACCTGT TACGGCGCAC CATGCGGATG
TCGTTACCGT CAGTGATCCG TGGCGACGGC AAGACGCTGT TCGAGGTTGA CGGCTCGGCC
GACGATGGCA ACCTAGTGCT GTTCCTTTAT ATCGACTTCA CCATCAAAAA TCGCGACATT
CGCGGCTTCA TCGCGCTACT AATGGATCTG CCGTCGATTA CCGCGCTGAA GCACATCGTC
GGTGAGTTCA TAGAGGGCGT CGAGAACCAA ACCGCGTAA
 
Protein sequence
MSIERGELTD IEQDALAEIA NLGVSRAAAS LRQMVGEQVL LSVPAVRIVA RDIAAQLVEG 
DNAQQLVAVK QSFDGPFAGK ALLIFPQAQS LELVRSIVGH EHSLEDVIDL EQEALAETGN
VILNACLATI ANLLRRTMRM SLPSVIRGDG KTLFEVDGSA DDGNLVLFLY IDFTIKNRDI
RGFIALLMDL PSITALKHIV GEFIEGVENQ TA