Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_4600 |
Symbol | |
ID | 3972091 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 5133557 |
End bp | 5134237 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637927711 |
Product | hypothetical protein |
Protein accession | YP_534441 |
Protein GI | 90426071 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCTGAAC AGAGCTTCAA GAGCACCACT CCGTCGAATT CCAGCGTCGG CAACTCGACG AAGCAGTCAG GCTCGGCGCC GCAGAGTCTG CGCGGCGTCA CCGAGCAGAC CGTGGCCGCC GGCCGGGATC TCAAGGAGGC CGGCAAGGAC GCCGGTCGCG ACATCAAGGA CAAGGCCGGC GACTTCAAGG ACAAGGTCAG CGAGCTGGCC GGCTCTTCGG CCGAGACCAT CAAGCATCAG GCCGCCGAGT TCACCGAAGC GGCGAAGGAT TTCGCCGCGC AGGCCGGCGA CAAGATCAAG GAACGCGTGC ACGACCAGCA GGGCGTCGGC GCCGACTATG TCGGCAATCT CGCCGAAACC ATGCGGCGCG CCGCCCGCGA GTTCGATCAG GATCTGCCGT TCGCCGCGAG CTACATCCGC AAGGCCGCGT CCAAGGTGGA AGGCGTGTCC GACAGCGTCC GCAACGGCGA TCTGCAGGAC TTGGTCGCCG GCGCGCAATC CTTCGCGCGG CGCCAGCCGA CCGCATTCCT CGGCCTCGCG GTGCTCGCCG GCTTCGGCGT GGTGCGGTTC CTGAAGAGTT CGGGCGATAA CGCCGGCGGC TCGGCCGACA CCGGCCGGGG CACCTCGCAG CGCGCGACGT CCGACGACAA CAGGGGGTAT CGCGATGAAT TCACCAGCTA A
|
Protein sequence | MAEQSFKSTT PSNSSVGNST KQSGSAPQSL RGVTEQTVAA GRDLKEAGKD AGRDIKDKAG DFKDKVSELA GSSAETIKHQ AAEFTEAAKD FAAQAGDKIK ERVHDQQGVG ADYVGNLAET MRRAAREFDQ DLPFAASYIR KAASKVEGVS DSVRNGDLQD LVAGAQSFAR RQPTAFLGLA VLAGFGVVRF LKSSGDNAGG SADTGRGTSQ RATSDDNRGY RDEFTS
|
| |