Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_4594 |
Symbol | |
ID | 3971893 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 5127532 |
End bp | 5128509 |
Gene Length | 978 bp |
Protein Length | 325 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637927705 |
Product | LysR family transcriptional regulator |
Protein accession | YP_534435 |
Protein GI | 90426065 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAATCC GACAGATCAG AGCCTTCCTG GCGGTCGCCG AGGACTTGCA TTTTCGCAAG GCGGCGGAGC GGCTTGGGCT GACCCAGCCG GCGCTGACTT TGGCGATCCA GGCGCTCGAG GAGGAGATCG GCGTGCCGCT GTTGCAGCGC GACCGCCACG ACACCAAGCT GACATTCGCC GGCGAGGTGT TCCGCGGCGA TATCACCGAG ATGCTGGCGA GCGCCGAACA GGCCGCCGAG CGCGTCCGCC GCGCCTCCGC CGGCATGTTC AACTATCTCA AGATCGGATT CATCTCGACC GCCACCACGG CGCGTTTCAT GCCGCGGCTG ATCAGCGAGT TTCGCCGGAT TCATCCTCAG GTCGAGCTCG GTCTGCAGAA CCACGTCAAC GTCGACCTGC TGGCGATGAT CGAGTCGGCG GCGCTCGATG TCGCCTTCAT CCGATTGCCG CTGGTGACGC CGCATCGGGT CGAAATCGCC AGCGTGTACA AGGAACGCCA CGTGCTGCTG TTGCCGGCCG ACCATCCGCT GACGCAACAG CCCTCGCTGC GGGTCCGCGA TCTGCAGAAT GCGCCGTTCA TCATGTATTC GCGGCGCAAC GCGCCCGGAT ATCACGACCT GATCATGCGC ACCCTCAACA GCAACGGCAT CAACCCGACG ATCGCCCAGG AGGTCGGCGA GATGTACACC CTGGTGGCGC TGGTGGCGGC CGGCATCGGC ATCGCCGTCG CGCCGATTTC CGCGCGCAAC TACAATCTTC CGGGGGTGGT CCTTCGCGAG GCCAGCTGGT TGCCGGCCGC CGAGATCGGT CTCGCCTTCC GCAAGGACGA CAGCAGACCG GCAAGCCGGC TGTTCATCGA TCTTGCGTTG CGCACCCGAC GGGAGAATGA AGCCGCCAGC GAGGACGAGG CGCCGACCGA TCCGAGTTCG CCTGCCGCGG CGGCGTTGAC GCGGCGCGAC GCCGCGGAAA AGGAGTGA
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Protein sequence | MKIRQIRAFL AVAEDLHFRK AAERLGLTQP ALTLAIQALE EEIGVPLLQR DRHDTKLTFA GEVFRGDITE MLASAEQAAE RVRRASAGMF NYLKIGFIST ATTARFMPRL ISEFRRIHPQ VELGLQNHVN VDLLAMIESA ALDVAFIRLP LVTPHRVEIA SVYKERHVLL LPADHPLTQQ PSLRVRDLQN APFIMYSRRN APGYHDLIMR TLNSNGINPT IAQEVGEMYT LVALVAAGIG IAVAPISARN YNLPGVVLRE ASWLPAAEIG LAFRKDDSRP ASRLFIDLAL RTRRENEAAS EDEAPTDPSS PAAAALTRRD AAEKE
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