Gene RPC_4594 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_4594 
Symbol 
ID3971893 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp5127532 
End bp5128509 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content66% 
IMG OID637927705 
ProductLysR family transcriptional regulator 
Protein accessionYP_534435 
Protein GI90426065 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATCC GACAGATCAG AGCCTTCCTG GCGGTCGCCG AGGACTTGCA TTTTCGCAAG 
GCGGCGGAGC GGCTTGGGCT GACCCAGCCG GCGCTGACTT TGGCGATCCA GGCGCTCGAG
GAGGAGATCG GCGTGCCGCT GTTGCAGCGC GACCGCCACG ACACCAAGCT GACATTCGCC
GGCGAGGTGT TCCGCGGCGA TATCACCGAG ATGCTGGCGA GCGCCGAACA GGCCGCCGAG
CGCGTCCGCC GCGCCTCCGC CGGCATGTTC AACTATCTCA AGATCGGATT CATCTCGACC
GCCACCACGG CGCGTTTCAT GCCGCGGCTG ATCAGCGAGT TTCGCCGGAT TCATCCTCAG
GTCGAGCTCG GTCTGCAGAA CCACGTCAAC GTCGACCTGC TGGCGATGAT CGAGTCGGCG
GCGCTCGATG TCGCCTTCAT CCGATTGCCG CTGGTGACGC CGCATCGGGT CGAAATCGCC
AGCGTGTACA AGGAACGCCA CGTGCTGCTG TTGCCGGCCG ACCATCCGCT GACGCAACAG
CCCTCGCTGC GGGTCCGCGA TCTGCAGAAT GCGCCGTTCA TCATGTATTC GCGGCGCAAC
GCGCCCGGAT ATCACGACCT GATCATGCGC ACCCTCAACA GCAACGGCAT CAACCCGACG
ATCGCCCAGG AGGTCGGCGA GATGTACACC CTGGTGGCGC TGGTGGCGGC CGGCATCGGC
ATCGCCGTCG CGCCGATTTC CGCGCGCAAC TACAATCTTC CGGGGGTGGT CCTTCGCGAG
GCCAGCTGGT TGCCGGCCGC CGAGATCGGT CTCGCCTTCC GCAAGGACGA CAGCAGACCG
GCAAGCCGGC TGTTCATCGA TCTTGCGTTG CGCACCCGAC GGGAGAATGA AGCCGCCAGC
GAGGACGAGG CGCCGACCGA TCCGAGTTCG CCTGCCGCGG CGGCGTTGAC GCGGCGCGAC
GCCGCGGAAA AGGAGTGA
 
Protein sequence
MKIRQIRAFL AVAEDLHFRK AAERLGLTQP ALTLAIQALE EEIGVPLLQR DRHDTKLTFA 
GEVFRGDITE MLASAEQAAE RVRRASAGMF NYLKIGFIST ATTARFMPRL ISEFRRIHPQ
VELGLQNHVN VDLLAMIESA ALDVAFIRLP LVTPHRVEIA SVYKERHVLL LPADHPLTQQ
PSLRVRDLQN APFIMYSRRN APGYHDLIMR TLNSNGINPT IAQEVGEMYT LVALVAAGIG
IAVAPISARN YNLPGVVLRE ASWLPAAEIG LAFRKDDSRP ASRLFIDLAL RTRRENEAAS
EDEAPTDPSS PAAAALTRRD AAEKE