| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4578 |
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| Symbol | |
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| ID | 3971800 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 5109092 |
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| End bp | 5111263 |
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| Gene Length | 2172 bp |
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| Protein Length | 723 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637927689 |
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| Product | formate dehydrogenase, alpha subunit |
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| Protein accession | YP_534419 |
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| Protein GI | 90426049 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3383] Uncharacterized anaerobic dehydrogenase |
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| TIGRFAM ID | [TIGR01591] formate dehydrogenase, alpha subunit, archaeal-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAAAAC ACATCTCTGT ATGTCCGTAC TGCGGATCGG GCTGTAAGCT CAACCTGCTC
GTCGAGAACG ACAAGGTAGT CGGCGCCGAG CCGCTGAACG GCGTCACCAA CCAGGGCGAG
CTCTGCCTGA AGGGCTACTA CGGCTGGGAT TTCATCAACG ACACCAAGAT CCTCACCCCG
CGTCTGCGTC AGCCGATGAT TCGCCGCACC CGCACATCGG AATTCGAGAC GGTGTCTTGG
GACGAGGCGA TCGCTTTCAC CGCCAAGCGG CTCGGCGACA TCAAGAAGAA GCATGGCCCC
GACTCGATCA TGCTGACCGG CTCCTCGCGC GGCACCGGCA ACGAATCCAA TTACATCGCG
CAGAAGTTCG CCCGCGCGGT GATCGGAACC AACAACGTCG ATTGCTGCGC CCGGGTCTGC
CATGGCCCGT CGGTTTCGGG ACTGATGGTC ACGCTCGGCA ACGGCGCGAT GAGCAACTCG
ATCTGCGAGA TCGAAGACAC CGACTGCATC CTGTGCTTCG GCTACAACGC CGCGGACAGC
CATCCGATCG TCGCGCGCCG GATCTTGAAG GCCAAAGAAA AGGGCGCCAA GATCATCACC
TGCGACCCGC GCTTCATCGA AACCGCCCGT ATTTCCGACA TGTGGCTCTC GTTGAAGAAC
GGCTCCAACA TGGCGCTGGT CAATGCTTTC GCCAATGTAT TGATCACCGA AGGCCTTTAT
GACCGTGATT TCGTCGAGAA ATACACTGAA GGCTTTGAAG AATACAAAGC AACTGTTGCG
AAATACACTC CCGAATACGT TGAAAGCATC ACCGGCCTGA AGGCTTCGCA GATCCGTGAA
GCGATGCACG TCTATGCCGC CGCCAAGTCG GCGACGATCC TGTGGGGCAT GGGCGTGACG
CAGTGGGGTC AGGCGGTCGA CGTGGTGAAG GGTCTGTCCG GCCTGGCACT GCTGACCGGC
AACCTCGGCC GTCCGAACGT CGGCGTCGGC CCGGTGCGCG GCCAGAACAA CGTTCAGGGC
GCCTGCGATA TGGGTGCACT GCCGAACGTG TTCCCGGGTT ACGAGTACGT CACCGATCCG
GAAGCCCGCA AGAAGTTCGC CAAGGCCTGG GGCGTGCCGA GCCTGCCGGA CAAGATCGGC
ATGTCGATCA CCGACGTGCC GCACGCTGCC GAAGAAGGCA AGCTGAAGGC GATGTACATC
TTCGGCGAAG ATCCGGCTCA GACCGAGCCC GACCTCGACT CGGTGCGCAA GGGCTTTGCG
GCGCTCGACT TCATCATCGT GCAGGACATC TTCATGACGA AGACGGCGAT GTATGCCGAC
GTCATCCTGC CGGCGACCTC GTGGGGCGAA CATGACGGCG TGTTCTCGTC GGCCGACCGC
GGCTTCCAGC GCTTCTACAA GGCGGTGAAT GCCAAGGGCG ACGTCAAGCA CGATTGGGAG
ATTTACGGCC TGCTCGCCAC CGCGATGGGC TATCCCATGA AGTACAGCAG CACCGACGAA
ATCTGGGCGG AGCTGATCTC GCTGTGCGAC CTCTACAAGG GAGCGACCTA CGAGCGTCTG
TCGGGCCTCG GCTACATTCA GTGGCCCTGC CCGGAAGAAG GCCATCCCGG CACGCCCTAC
CTCTACGAAG GCAACAAGTT CCAGACCAAG AGCGGCAAGG GCCTGTTGTT CGCGTCCGAA
TGGCGTCCGC CGTTGGAGAA GGTCGATGCG GAATACCCGC TCGGTCTCTG CACGGTTCGC
GAAGTCGGGC ATTACTCCTG CCGTTCGATG ACCGGCAACT GCTCCGCCCT CACCGCGCTT
GCGGATGAGC CGGGCTACGT CACCATGAAC CCGGTCGACG CCGCCAAGCT CGGAATCAAG
GACGAGCAGC TGGTCTATGT CGCATCACGT CGCGGCAAGG TGATCTCGCG TGCGAAGATC
ACCGAGCGGA CCAACCTCGG GGTGGTCTAT ATGACCTACC AGTGGTGGAT CGGCGCGTGC
AACGAACTGA CCATCCATCA CGTCGATCCG ATCTCGAAGA CGCCGGAATA CAAGTTCGCC
GCCGTGCGTG TCGAGGCCAT CGCCGATCAG GTGTGGGCCG AGTCGCACGT TCAGCAGGAC
TATACCAACC TGAAGAAGCG CCTTGCCGCG GCGGCCAATC CGGTCGCCGC GAAGGTGGTT
CAGCCGGCCT AA
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| Protein sequence | MEKHISVCPY CGSGCKLNLL VENDKVVGAE PLNGVTNQGE LCLKGYYGWD FINDTKILTP
RLRQPMIRRT RTSEFETVSW DEAIAFTAKR LGDIKKKHGP DSIMLTGSSR GTGNESNYIA
QKFARAVIGT NNVDCCARVC HGPSVSGLMV TLGNGAMSNS ICEIEDTDCI LCFGYNAADS
HPIVARRILK AKEKGAKIIT CDPRFIETAR ISDMWLSLKN GSNMALVNAF ANVLITEGLY
DRDFVEKYTE GFEEYKATVA KYTPEYVESI TGLKASQIRE AMHVYAAAKS ATILWGMGVT
QWGQAVDVVK GLSGLALLTG NLGRPNVGVG PVRGQNNVQG ACDMGALPNV FPGYEYVTDP
EARKKFAKAW GVPSLPDKIG MSITDVPHAA EEGKLKAMYI FGEDPAQTEP DLDSVRKGFA
ALDFIIVQDI FMTKTAMYAD VILPATSWGE HDGVFSSADR GFQRFYKAVN AKGDVKHDWE
IYGLLATAMG YPMKYSSTDE IWAELISLCD LYKGATYERL SGLGYIQWPC PEEGHPGTPY
LYEGNKFQTK SGKGLLFASE WRPPLEKVDA EYPLGLCTVR EVGHYSCRSM TGNCSALTAL
ADEPGYVTMN PVDAAKLGIK DEQLVYVASR RGKVISRAKI TERTNLGVVY MTYQWWIGAC
NELTIHHVDP ISKTPEYKFA AVRVEAIADQ VWAESHVQQD YTNLKKRLAA AANPVAAKVV
QPA
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