| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4577 |
|---|
| Symbol | |
|---|
| ID | 3971799 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | + |
|---|
| Start bp | 5108492 |
|---|
| End bp | 5109058 |
|---|
| Gene Length | 567 bp |
|---|
| Protein Length | 188 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637927688 |
|---|
| Product | 4Fe-4S ferredoxin, iron-sulfur binding |
|---|
| Protein accession | YP_534418 |
|---|
| Protein GI | 90426048 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1142] Fe-S-cluster-containing hydrogenase components 2 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATCGAT TCATCGTCAG CGAACCCAAC AAGTGTATTG GGTGTCATAC TTGCGAGGTG
GCGTGCGCGC TTGCGCACGA GGCGTCGCAG AGCGTGGACG CGCTCACGCC CTCAAACTTC
GCGCCGCGCA TTCGGCTGAT GCAGACCCTC ACGGTGTCGA CCCCCGTGAC CTGTCACCAT
TGCGAAGAAG CGCCGTGCCT GAAAGCCTGC CCGAGCGGCG CCATCTATTA TAAAGCCGGC
ACCGTCCAGG TCGATCAGTC GCATTGTTTG GGTTGCAAGA CCTGCGTCGT CGCCTGCCCG
TTCGGCGTGA TGGAAGTGAT TACCCATCCG ACCTACCGCA CCTTTGCCGG CGTCACGGTG
GCCGACGGCC TCAAGGCCGA AGCCCACAAA TGCGACCTCT GCATCAACCG TGAAAAGGGC
CCGGCCTGTG TCGAGGTCTG CCCGACCGCC GCCTTGCACG TCATGGACGA AGCCAAGATG
GCCGAGCTGC AGCGCGAGCG GCGGCTGCGT TCCGCCGTCA GCGGCGGATT GACCGGCACC
GCCGGCGACA TCATCAACGC CAACTAA
|
|---|
| Protein sequence | MNRFIVSEPN KCIGCHTCEV ACALAHEASQ SVDALTPSNF APRIRLMQTL TVSTPVTCHH
CEEAPCLKAC PSGAIYYKAG TVQVDQSHCL GCKTCVVACP FGVMEVITHP TYRTFAGVTV
ADGLKAEAHK CDLCINREKG PACVEVCPTA ALHVMDEAKM AELQRERRLR SAVSGGLTGT
AGDIINAN
|
|---|
| |