| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4557 |
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| Symbol | |
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| ID | 3971837 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 5088900 |
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| End bp | 5090069 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637927668 |
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| Product | hydrogenase expression/formation protein HypD |
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| Protein accession | YP_534398 |
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| Protein GI | 90426028 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0409] Hydrogenase maturation factor |
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| TIGRFAM ID | [TIGR00075] hydrogenase expression/formation protein HypD |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCGA CCCAAGCCAA GAACTTTGCC GACGAATTCC GCGATCCGGC GCATGCCCGC
GCCGAATTGA CGCGGATCGC AAGGCTCGCC GCCGCGCTCG GCGCCACCCA CGACAAGCCG
GTCTCGATCA TGGAGATCTG CGGCGGCCAT ACGCACACGA TTTTTCGCCA TGGCCTCGAT
CGCTTGATCG ATGACGGCAT CGAATTCGTC CATGGCCCGG GCTGCCCGGT CTGCGTGCTG
CCGCAGGCGC GGATCGACGA ATGCATCGAG ATCGCCAGCC GTCCCGGCGT GGTGCTGGCA
ACCTTCGGCG ACGCGGTGCG GGTGCCGGGC ACGCAGGGTT CGCTGCTGGT CGCTAAGGCC
AAGGGCGCCG ACGTGCGCAT CGTCTATTCG CCGCTCGATG CGCTGGCGCT GGCGCGCAAG
CTGCCGGACC GCGAAGTGGT GTTCTTCGCC ATCGGTTTCG AGACCACGAT GCCGGCCACC
GCGCTGACGC TGCTGCAGGC CGAACGCGAG GGCATCAAGA ATTTCTCGCT GTTCTGCAAT
CACATCACGG TGCCGCAGCC GCTGCGCGTG CTGCTGCAGG ACCCGATGAT GCAGATCCAC
GGCTTCGTCG GCCCCGGCCA TGTCAGCATG GTGATCGGGC TGGAGCCGTA TGAGTTCATC
GCCGAACAAT TCCACCGCCC GGTGGTGGTC GCGGGCTTCG AGCCGGTCGA TCTGTTGCAA
TCGGTGGCGA TGGTGCTGAC GCAACTGGTC GAAGGCCGCG CCGAGGTGGA AAATCAGTAC
GCGCGGGTGG TGCGCAAGGC CGGCAATCCG CAGGCGCTGG CGGCGATCGA CGCGGTGTTC
GAGCCGCGCG CCAGCTTCGA ATGGCGCGGC CTCGGCGAGA TCGAATGGTC GGGCATGAAG
ATTCGCGGCC GCTACGCCGC GTTCGACGCC GAGCAGAAAT TCGGCGTCGG CTATGGCGGC
ACGCGGGCGG CGACCGCGCC CGAACTGGCG GATTGCCGCT GCGGTGAAGT GGTGAAGGGC
GCGGTGAAGC CGCCGGATTG TCCGCTGTTC GGCACGGTGT GCCGGCCGGA AACGCCGGTC
GGCGCGCTGA TGGTGTCGTC GGAAGGGTCT TGCGCGGCGT ATTGGCAATA TGCCGGGCGG
CGCGTCGCCA CGGCGGAGGC TGCGGTATGA
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| Protein sequence | MTATQAKNFA DEFRDPAHAR AELTRIARLA AALGATHDKP VSIMEICGGH THTIFRHGLD
RLIDDGIEFV HGPGCPVCVL PQARIDECIE IASRPGVVLA TFGDAVRVPG TQGSLLVAKA
KGADVRIVYS PLDALALARK LPDREVVFFA IGFETTMPAT ALTLLQAERE GIKNFSLFCN
HITVPQPLRV LLQDPMMQIH GFVGPGHVSM VIGLEPYEFI AEQFHRPVVV AGFEPVDLLQ
SVAMVLTQLV EGRAEVENQY ARVVRKAGNP QALAAIDAVF EPRASFEWRG LGEIEWSGMK
IRGRYAAFDA EQKFGVGYGG TRAATAPELA DCRCGEVVKG AVKPPDCPLF GTVCRPETPV
GALMVSSEGS CAAYWQYAGR RVATAEAAV
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