Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_4556 |
Symbol | |
ID | 3971836 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 5087869 |
End bp | 5088903 |
Gene Length | 1035 bp |
Protein Length | 344 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637927667 |
Product | hydrogenase expression/formation protein HypE |
Protein accession | YP_534397 |
Protein GI | 90426027 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0309] Hydrogenase maturation factor |
TIGRFAM ID | [TIGR02124] hydrogenase expression/formation protein HypE |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAAGT TGATTGGGAC GGTGGTGACG CTGGCGCATG GCGGCGGCGG CAAGGCGATG CGCGACCTCG TCGCCGAAGT GTTCATGCCG GCGTTCGACA ATCCGATTCT CGGCGTCATG GAAGATCAGG CGCGGCTCGA GCTCGGCGCA CTGTCGGTGC CTGGCGCGCG GCTCGCCTTC ACCACCGACG GCTTCGTGGT GCGACCGCTG GAATTTCCCG GCGGCGATAT CGGCAAGCTC GCGGTGTGCG GCACGGTGAA CGATCTCGCA GTCGGCGGCG CCACGCCGCT GTGGCTGTCC TGCGCGGTGG TGATCGAGGA AGGTTTTGAA TTCGAAAAGC TGCGCCGCAT CGTGGCGTCG ATGCGGGCCT CGGCGGCCGA GGCCGGCGTG CTGATCGTCA CCGGCGACAC CAAGGTGGTG GAGCGCGGCG CGGCCGACGG ATTGTTCATT ACCACCGCCG GCGTCGGGGT GTTTCCGCCG GGGCGCAATC TCGCCGCGGT GAATGTGCGG CCGGGCGACG TGGTGCTGGT CAATGGCCCG ATCGGCGATC ACGGCGCCGC GGTGATGGCC GCGCGCGGCG ATCTATTGCT GGAAACCAAG TTGATCAGCG ATTGCCGTCC GCTCAACGGC CTGATGAATG CGCTGCTTGA GGCCGCGCCC GCCACGCGTT GCGCGCGCGA TGCGACCCGC GGCGGCGTCG CCGCGGTGCT GAACGAAATC GCGGCGGCCG CCAAGATCGG CGTCGCGATC GACGAGGCGA AGATTCCGGT GCGTCCCGAA GTCGACGGCG TCTGCGAAAT TTTGGGCCTC GATCCCTTGT ATCTCGCCAA TGAAGGCACC TTGGTCGCGG TGGTGCCGGC CGATCAGGCC GACGCCGCGC TGGCGGCGTG GCGTGCCCGC GCCGATGGAA CTGATGCTTG CGCGATCGGC GAGATCACCG CGGGGCCGTC CGGCGACGTG GTGATGCGCA CCCGGTTCGG CAGCGAGCGA CTGGTCGATC TGATGATCGG CGATCAATTG CCGCGGATTT GCTGA
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Protein sequence | MSKLIGTVVT LAHGGGGKAM RDLVAEVFMP AFDNPILGVM EDQARLELGA LSVPGARLAF TTDGFVVRPL EFPGGDIGKL AVCGTVNDLA VGGATPLWLS CAVVIEEGFE FEKLRRIVAS MRASAAEAGV LIVTGDTKVV ERGAADGLFI TTAGVGVFPP GRNLAAVNVR PGDVVLVNGP IGDHGAAVMA ARGDLLLETK LISDCRPLNG LMNALLEAAP ATRCARDATR GGVAAVLNEI AAAAKIGVAI DEAKIPVRPE VDGVCEILGL DPLYLANEGT LVAVVPADQA DAALAAWRAR ADGTDACAIG EITAGPSGDV VMRTRFGSER LVDLMIGDQL PRIC
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