Gene RPC_4549 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_4549 
Symbol 
ID3971829 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp5078760 
End bp5080877 
Gene Length2118 bp 
Protein Length705 aa 
Translation table11 
GC content65% 
IMG OID637927660 
Productpotassium-transporting ATPase subunit B 
Protein accessionYP_534390 
Protein GI90426020 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2216] High-affinity K+ transport system, ATPase chain B 
TIGRFAM ID[TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01497] K+-transporting ATPase, B subunit 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.863518 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATAAAC TCAAAACCAG CAGGCGGGCC AGCCGCTCGG CGATGATCGA TCCGGCGATC 
ATGCTGCCGG CGGTCGGTCA GGCCTTCGTC AAGCTCGATC CGCGGCTGAT GATCAAGAAC
CCGGTGATGT TCGTGGTCGA AGTCGTCGCG GCGTTGACCA CGGTGATCTT CGCCAAAAAC
GTGGTGCAGG GTGGCGCCGA TCTCGGCTTC ACCTTCCAGA TCATCCTGTG GCTGTGGTTC
ACCGTATTGT TCGCCAACTT TGCCGAAGCG GTCGCCGAAG GCCGCGGCAA GGCGCAGGCC
GACACGCTGC GGCAGACCCG CTCCAACACC AAGGCCAAGC GGCTGCTGAT CGAGGACAAC
TTCGAACTCT ACGAAGGCGT CGCCGCGGAG CAGCTGGAGC AAGGCGATCT GGTGCTGGTC
GAAGCCGGCG ATATCATTCC CGGCGACGGC GAAGTGATCC GCGGCGTGGC CTCGGTCAAC
GAGGCGGCGA TCACTGGCGA ATCCGCCCCG GTGATCCGCG AATCCGGCGG CGACCGTTCG
GCGGTGACCG GCGGCACGCT GGTGATTTCC GATCGCATCG TGGTGCGGAT CACCGCATCG
AAGGGCACCT CGTTCCTCGA TCGCATGATC GGCCTGATCG AAGGCGCGGC GCGGCAGAAG
ACACCGAACG AGATCGCGCT GAACATTCTG CTGATCGGCC TCACCATCAT CTTCATCTTC
GCCACCGTGA CGATCCCGAG CTACGCCGCC TATGCGGGCG GTTCGATCTC GGTGGTGGTG
CTGGTGGCGC TGTTCGTGAC GTTGATCCCG ACCACGATCG GCGCGCTGTT GTCGGCGATC
GGCATCGCCG GCATGGACCG GCTGGTGCGC TTCAACGTGC TGGCGATGAG TGGCCGCGCG
GTGGAGGCCG CCGGCGACGT CGACACCTTG CTGCTCGACA AGACCGGCAC CATCACGCTC
GGCAATCGCG AGGCCACCGA ATTCCGCCCG GTGCACGGCG TCAGCGAACT TGAACTGGCT
GATGCGGCGC AGCTGGCCTC GCTGGCCGAC GAGACGCCGG AAGGTCGCTC CATCGTGGTG
CTGGCGAAAG AGAAGCACGG CCTGCGCAGC CGCGACATGG CGGAGCTCAA CGCCGCCTTC
ATTCCGTTCA CCGCGCAGAC AAGGATGAGC GGCGTCGATG CCGGCGCGTC CTGGGTGCGT
AAGGGCGCGG TGGATGCGAT CCTCAACCAT GTCGAAGGCG GTGGGCGGTC GCGCGCCATC
GCATCAGGCA ACGCGGCGCG CGCGATGGCG TCGATGTCGG AGCCGGCGCG GGAGATCTTC
GCGATCGCCG ACGAGGTGGC CAAGGCCGGC GGCACGCCTT TGGCGGTCGC CAAGGACGGC
CGGCTGCTCG GCGTTGTTCA CCTCAAGGAC ATCGTCAAGG GCGGCATTCG CGAGCGCTTC
GCCGAATTGC GGCGGATGGG CATCCGCACC GTGATGATCA CCGGCGACAA TCCGATGACC
GCAGCGGCGA TCGCCGCCGA AGCCGGGGTC GACGACTTCC TGGCGCAGGC CACGCCGGAG
GACAAATTGA AACTGATCCG CGACGAACAG GCCAAAGGAA AACTGGTAGC GATGTGCGGT
GACGGCACCA ACGACGCCCC GGCGCTCGCG CAGGCCGACG TCGGTGTGGC GATGAACACA
GGAACGCAGG CGGCGCGCGA AGCCGGCAAC ATGGTCGACC TGGATTCCAA CCCGACCAAG
CTGATCGAGG TGGTGGAAAT CGGCAAGCAG CTGTTGATGA CGCGCGGCGC GCTGACCACG
TTTTCGATCG CCAACGACGT GGCGAAGTAC TTCGCCATCA TCCCGGCGAT CTTCCTCGCC
TTCTATCCGC AGCTGCAGGC GCTCAACGTC ATGCAGCTGG CGAGCCCGCA GAGCGCGATC
CTGTCGGCGA TCATCTTCAA CGCGCTGATC ATCATCGCGC TGATCCCGCT GGCCTTGAAG
GGCGTCGCCT ACCGCGCCAT CGGCGCCGGC GCGCTGCTGC GCCGCAACCT GCTGGTCTAT
GGGCTCGGTG GCTTGATTAT CCCGTTCGTC GGCATCAAGG CGATCGACCT TGCGGTCAAC
GCTTTGCATC TGGTTTGA
 
Protein sequence
MDKLKTSRRA SRSAMIDPAI MLPAVGQAFV KLDPRLMIKN PVMFVVEVVA ALTTVIFAKN 
VVQGGADLGF TFQIILWLWF TVLFANFAEA VAEGRGKAQA DTLRQTRSNT KAKRLLIEDN
FELYEGVAAE QLEQGDLVLV EAGDIIPGDG EVIRGVASVN EAAITGESAP VIRESGGDRS
AVTGGTLVIS DRIVVRITAS KGTSFLDRMI GLIEGAARQK TPNEIALNIL LIGLTIIFIF
ATVTIPSYAA YAGGSISVVV LVALFVTLIP TTIGALLSAI GIAGMDRLVR FNVLAMSGRA
VEAAGDVDTL LLDKTGTITL GNREATEFRP VHGVSELELA DAAQLASLAD ETPEGRSIVV
LAKEKHGLRS RDMAELNAAF IPFTAQTRMS GVDAGASWVR KGAVDAILNH VEGGGRSRAI
ASGNAARAMA SMSEPAREIF AIADEVAKAG GTPLAVAKDG RLLGVVHLKD IVKGGIRERF
AELRRMGIRT VMITGDNPMT AAAIAAEAGV DDFLAQATPE DKLKLIRDEQ AKGKLVAMCG
DGTNDAPALA QADVGVAMNT GTQAAREAGN MVDLDSNPTK LIEVVEIGKQ LLMTRGALTT
FSIANDVAKY FAIIPAIFLA FYPQLQALNV MQLASPQSAI LSAIIFNALI IIALIPLALK
GVAYRAIGAG ALLRRNLLVY GLGGLIIPFV GIKAIDLAVN ALHLV