Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_4549 |
Symbol | |
ID | 3971829 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 5078760 |
End bp | 5080877 |
Gene Length | 2118 bp |
Protein Length | 705 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637927660 |
Product | potassium-transporting ATPase subunit B |
Protein accession | YP_534390 |
Protein GI | 90426020 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2216] High-affinity K+ transport system, ATPase chain B |
TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC [TIGR01497] K+-transporting ATPase, B subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.863518 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATAAAC TCAAAACCAG CAGGCGGGCC AGCCGCTCGG CGATGATCGA TCCGGCGATC ATGCTGCCGG CGGTCGGTCA GGCCTTCGTC AAGCTCGATC CGCGGCTGAT GATCAAGAAC CCGGTGATGT TCGTGGTCGA AGTCGTCGCG GCGTTGACCA CGGTGATCTT CGCCAAAAAC GTGGTGCAGG GTGGCGCCGA TCTCGGCTTC ACCTTCCAGA TCATCCTGTG GCTGTGGTTC ACCGTATTGT TCGCCAACTT TGCCGAAGCG GTCGCCGAAG GCCGCGGCAA GGCGCAGGCC GACACGCTGC GGCAGACCCG CTCCAACACC AAGGCCAAGC GGCTGCTGAT CGAGGACAAC TTCGAACTCT ACGAAGGCGT CGCCGCGGAG CAGCTGGAGC AAGGCGATCT GGTGCTGGTC GAAGCCGGCG ATATCATTCC CGGCGACGGC GAAGTGATCC GCGGCGTGGC CTCGGTCAAC GAGGCGGCGA TCACTGGCGA ATCCGCCCCG GTGATCCGCG AATCCGGCGG CGACCGTTCG GCGGTGACCG GCGGCACGCT GGTGATTTCC GATCGCATCG TGGTGCGGAT CACCGCATCG AAGGGCACCT CGTTCCTCGA TCGCATGATC GGCCTGATCG AAGGCGCGGC GCGGCAGAAG ACACCGAACG AGATCGCGCT GAACATTCTG CTGATCGGCC TCACCATCAT CTTCATCTTC GCCACCGTGA CGATCCCGAG CTACGCCGCC TATGCGGGCG GTTCGATCTC GGTGGTGGTG CTGGTGGCGC TGTTCGTGAC GTTGATCCCG ACCACGATCG GCGCGCTGTT GTCGGCGATC GGCATCGCCG GCATGGACCG GCTGGTGCGC TTCAACGTGC TGGCGATGAG TGGCCGCGCG GTGGAGGCCG CCGGCGACGT CGACACCTTG CTGCTCGACA AGACCGGCAC CATCACGCTC GGCAATCGCG AGGCCACCGA ATTCCGCCCG GTGCACGGCG TCAGCGAACT TGAACTGGCT GATGCGGCGC AGCTGGCCTC GCTGGCCGAC GAGACGCCGG AAGGTCGCTC CATCGTGGTG CTGGCGAAAG AGAAGCACGG CCTGCGCAGC CGCGACATGG CGGAGCTCAA CGCCGCCTTC ATTCCGTTCA CCGCGCAGAC AAGGATGAGC GGCGTCGATG CCGGCGCGTC CTGGGTGCGT AAGGGCGCGG TGGATGCGAT CCTCAACCAT GTCGAAGGCG GTGGGCGGTC GCGCGCCATC GCATCAGGCA ACGCGGCGCG CGCGATGGCG TCGATGTCGG AGCCGGCGCG GGAGATCTTC GCGATCGCCG ACGAGGTGGC CAAGGCCGGC GGCACGCCTT TGGCGGTCGC CAAGGACGGC CGGCTGCTCG GCGTTGTTCA CCTCAAGGAC ATCGTCAAGG GCGGCATTCG CGAGCGCTTC GCCGAATTGC GGCGGATGGG CATCCGCACC GTGATGATCA CCGGCGACAA TCCGATGACC GCAGCGGCGA TCGCCGCCGA AGCCGGGGTC GACGACTTCC TGGCGCAGGC CACGCCGGAG GACAAATTGA AACTGATCCG CGACGAACAG GCCAAAGGAA AACTGGTAGC GATGTGCGGT GACGGCACCA ACGACGCCCC GGCGCTCGCG CAGGCCGACG TCGGTGTGGC GATGAACACA GGAACGCAGG CGGCGCGCGA AGCCGGCAAC ATGGTCGACC TGGATTCCAA CCCGACCAAG CTGATCGAGG TGGTGGAAAT CGGCAAGCAG CTGTTGATGA CGCGCGGCGC GCTGACCACG TTTTCGATCG CCAACGACGT GGCGAAGTAC TTCGCCATCA TCCCGGCGAT CTTCCTCGCC TTCTATCCGC AGCTGCAGGC GCTCAACGTC ATGCAGCTGG CGAGCCCGCA GAGCGCGATC CTGTCGGCGA TCATCTTCAA CGCGCTGATC ATCATCGCGC TGATCCCGCT GGCCTTGAAG GGCGTCGCCT ACCGCGCCAT CGGCGCCGGC GCGCTGCTGC GCCGCAACCT GCTGGTCTAT GGGCTCGGTG GCTTGATTAT CCCGTTCGTC GGCATCAAGG CGATCGACCT TGCGGTCAAC GCTTTGCATC TGGTTTGA
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Protein sequence | MDKLKTSRRA SRSAMIDPAI MLPAVGQAFV KLDPRLMIKN PVMFVVEVVA ALTTVIFAKN VVQGGADLGF TFQIILWLWF TVLFANFAEA VAEGRGKAQA DTLRQTRSNT KAKRLLIEDN FELYEGVAAE QLEQGDLVLV EAGDIIPGDG EVIRGVASVN EAAITGESAP VIRESGGDRS AVTGGTLVIS DRIVVRITAS KGTSFLDRMI GLIEGAARQK TPNEIALNIL LIGLTIIFIF ATVTIPSYAA YAGGSISVVV LVALFVTLIP TTIGALLSAI GIAGMDRLVR FNVLAMSGRA VEAAGDVDTL LLDKTGTITL GNREATEFRP VHGVSELELA DAAQLASLAD ETPEGRSIVV LAKEKHGLRS RDMAELNAAF IPFTAQTRMS GVDAGASWVR KGAVDAILNH VEGGGRSRAI ASGNAARAMA SMSEPAREIF AIADEVAKAG GTPLAVAKDG RLLGVVHLKD IVKGGIRERF AELRRMGIRT VMITGDNPMT AAAIAAEAGV DDFLAQATPE DKLKLIRDEQ AKGKLVAMCG DGTNDAPALA QADVGVAMNT GTQAAREAGN MVDLDSNPTK LIEVVEIGKQ LLMTRGALTT FSIANDVAKY FAIIPAIFLA FYPQLQALNV MQLASPQSAI LSAIIFNALI IIALIPLALK GVAYRAIGAG ALLRRNLLVY GLGGLIIPFV GIKAIDLAVN ALHLV
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