| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4542 |
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| Symbol | |
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| ID | 3971822 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 5071387 |
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| End bp | 5072184 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637927653 |
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| Product | TonB-like |
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| Protein accession | YP_534383 |
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| Protein GI | 90426013 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
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| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGTGG CCTCCTATCG CGGCGTCACC CGCAAGGATT TTGCGCGCTG GGGGCTCTGC
TTTGTGGTGA CGCTGAGCCT GCACGGCGCG GTCGCCGCGG CGCTGCTGGC CAAGCCGCCA
GCGGAAGGCG ATACGCAGGA TTCCGTCACC GCGATCGATG TCGATTTCAC CACCGAATCC
TTCAAGGACT CCCAAGCCCG CGACGTCGCT CCCGGCGAGG AGCAGATGCA GACCGACGCC
GCTCCGCCGC CGATGGAGAA GGCCGAACTC AAGGCCGAGG ACAAGACCGA GCCGGTCAAG
GATCCGCAGC CGACGCCCGA CGAACCGATA GCGACGCCGC CGTTGCCGGC GGTGGCCGAG
CCCGACGTCG CGCTCGACAC CGCGGCGCCG CCGGAGAAAA AGAAAGAAGA AGAAAAGAAA
GACGACGCCG AGAAGACTCC GAACGCGGCG CCGCCGGTGG TCGCGGCCTC CGCCACCACG
GCGCCAACGG CGTCGGCCGC GCGCACTGCG ATGCTGGTGA GCTGGAAGCG GCAGCTGGCG
CTGCATCTGC AGCGCAACAA GCGCTACCCG CCGGACGCCC AGGCGCGGCG CGAGAGCGGC
GTCGCCAAGG TGTCGTTCGT GGTCGACCGC CAGGGCCGCG TGATGTCGAG TTCGATCGTC
AAGGGCAGCG GCTCGGAGGC GCTCGACCGC GAGACGCTGG CGCTGTTACA GCGCGCGCAG
CCGTTGCCGG TGCCGCCCGC CGAGGTCGGC GGCCCCCAGT TCGCGTTCTC GGTGCCGATC
CTGTTCCAAT TGAAATGA
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| Protein sequence | MSVASYRGVT RKDFARWGLC FVVTLSLHGA VAAALLAKPP AEGDTQDSVT AIDVDFTTES
FKDSQARDVA PGEEQMQTDA APPPMEKAEL KAEDKTEPVK DPQPTPDEPI ATPPLPAVAE
PDVALDTAAP PEKKKEEEKK DDAEKTPNAA PPVVAASATT APTASAARTA MLVSWKRQLA
LHLQRNKRYP PDAQARRESG VAKVSFVVDR QGRVMSSSIV KGSGSEALDR ETLALLQRAQ
PLPVPPAEVG GPQFAFSVPI LFQLK
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