Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_4536 |
Symbol | |
ID | 3972085 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 5066511 |
End bp | 5067632 |
Gene Length | 1122 bp |
Protein Length | 373 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637927647 |
Product | NLPA lipoprotein |
Protein accession | YP_534377 |
Protein GI | 90426007 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
TIGRFAM ID | [TIGR03427] ABC transporter periplasmic binding protein, urea carboxylase region |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.996244 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTCTATC GCCATTCCCT TTTTGTATTT TTTACAAGAG GGATCGCAAT GAACAAACTC AGCTCCATTC TCCGAAACAT GGCTCTGGCG TCGGCAATGA TCGCCGTAGC CGTGTCGAGT GCCGACGCCG CGCCGAAGAA GGATTTCAAG GTCGCTTGGT CGATCTATGT CGGCTGGATG CCGTGGGGCT ATGCCGCCGA CACCGGCATC GTCAAGAAAT GGGCCGACAA ATACGGCATC ACCATCGAGG TCAAGCAGTT CAACGACTAC GTCGAATCGA TCAACCAATA CACCGCCGGC TCCTATGACG CGGTGACCAT CACCAACATG GACGCGCTGT CGATCCCCGC CGCCGGCGGC GTCGACACCA CCGCGCTGGT GATGGGCGAC TTTTCCAACG GCAACGACGC GGTGATCCTG AAGGGCAAGT CGGATCTCGC CGCGATCAAG GGCCAGAAGG TCAACCTGGT CGAGTTCTCG GTGTCGCATT ATCTCTTGGC GCGCGCGCTG GAGACCAAGA AGCTCGCCGA AAAGGACATC AAGGTCGTCA ACACCTCCGA CGCCGATCTC GCCGCCGCCT ACAAGACCCC CGAAGTCACC GCGGTGGTGA CCTGGAATCC GATCGTCGCC GAAATCCTCA CCGCGCCGGA CGCCAAGAAG GTGTTCGATT CCTCGCAGAT CCCCGGCGAG ATCATCGACC TGATGGTCGC CAACACCGCG GTGGTGAAGG ACAATCCGGA CTTCGCCAAG GCGCTGGTCG GGATCTGGTA CGAGACCATC GCCAAGATGA CCGCGGCCGG CGCCGACGGC AAGGCCGCCA AGGAAGCGAT GGCCAAGGCC TCCGGCACCG ATCTCGCCGG CTTCGACAGC CAGCTCGCCT CGACCAAATT GTTCGACAAG CCGGCCGACG CCGAAGCCTT CACCAAGAGC GCCACGGTCG GCAAGACCAT GGACCGGGTG CGCAAATTCC TGTTCGAGAA GGAACTGCTC GGCAAGGGCG CGAAGTCGGC CGATGCGGTC GGCATCGAGC TCGGCGACAA GACCGTGCTC GGCGACAAGG CCAATGTGAA GCTGCGCTTC GACGCCAGCT ACATGGACCT CGCCGCCAAG GGCAAGCTGT AA
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Protein sequence | MVYRHSLFVF FTRGIAMNKL SSILRNMALA SAMIAVAVSS ADAAPKKDFK VAWSIYVGWM PWGYAADTGI VKKWADKYGI TIEVKQFNDY VESINQYTAG SYDAVTITNM DALSIPAAGG VDTTALVMGD FSNGNDAVIL KGKSDLAAIK GQKVNLVEFS VSHYLLARAL ETKKLAEKDI KVVNTSDADL AAAYKTPEVT AVVTWNPIVA EILTAPDAKK VFDSSQIPGE IIDLMVANTA VVKDNPDFAK ALVGIWYETI AKMTAAGADG KAAKEAMAKA SGTDLAGFDS QLASTKLFDK PADAEAFTKS ATVGKTMDRV RKFLFEKELL GKGAKSADAV GIELGDKTVL GDKANVKLRF DASYMDLAAK GKL
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