| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4529 |
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| Symbol | |
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| ID | 3972078 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 5056231 |
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| End bp | 5058591 |
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| Gene Length | 2361 bp |
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| Protein Length | 786 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637927640 |
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| Product | carbon-monoxide dehydrogenase |
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| Protein accession | YP_534370 |
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| Protein GI | 90426000 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1529] Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs |
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| TIGRFAM ID | [TIGR02416] carbon-monoxide dehydrogenase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.565875 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCGTTG AAGGCATTGG CGCGAGCGTG GTGCGCAAGG AAGACCGCCG TTTCATCACC
GGGCGCGGCC GCTATGTCGA CGACATCAAG GTGATGGGCA TGACCCACGC CTATTTCGTC
CGCAGCCCGC ACGCCCACGC CAAGGTGATC AGCATCGACG TCGAAGCCGC CAAGGCGATG
CCCGGCGTGG TCGACGTGTT GACCGGCCAG CAGATCGTCG ACGACAAGGT CGGCAATCTG
ATCTGCGGCT GGGCGGTGCA TTCCAAGGAC GGCTCGGCGA TGAAGATGGG CGCCTGGCCG
GCGATGGCGC CGGAGACCGT GCGCTTCGTC GGCCAAGCGG TCGCGGTGGT GATCGCCGAG
AGCCGGAACC TGGCGCGCGA CGCCGCCGAA GCCGTGGTGG TGCATTACGA AGAACTGCCG
AGCGCCCACC ACATCGCGAT GGCGATCGCG CCCGGCGCGC CGCAGCTGCA TCCCGAGGCG
CCCGGCAACA TCGTGTACGA CTGGTCGATC GGCGAGGAGA AGGCGGTCGA CGAGGCGTTT
GCCAAGGCCG CCAATGTGGT GACGTTCGAG CTGGTCAATA ACCGCCTGGT GCCGAACGCG
ATGGAGCCGC GCGCCGCACT CGCCGAATAC AACGAGGCCG AAGAACACTT CACGCTGCAC
ACCACCTCGC AGAACCCGCA TGTCGCGCGC CTAGTGCTGT CGGCGTTCTA CAACATCGCG
CCGGAACACA AGCTGCGGGT AGTGGCGCCG GACGTCGGCG GCGGCTTCGG TTCCAAGATC
TTCATCTATC CGGAAGAGAT GGTGGCTTTG TGGGCGTCGA AGAAAGTCCG CCGCCCGGTG
AAGTGGACCG GCGACCGCAA CGAAGCGTTC CTGACCGACG CCCATGGCCG CGATCATATC
TCCAAAGCCG AGATGGCGTT CGACGCCGAC AACAAGATCC TCGGGCTCAG GGTGAAGACC
CACGCCAATT TCGGCGCCTA TATGTCGCTG TTCTCCTCCT CGGTGCCGAC CTATCTGTAC
GCCACGCTGT TGTCCGGCCA GTACAACATC CCGGCGATCT ATGCCGAGGT GATCGGCGTC
TATACCAACA CCACGCCGGT CGACGCCTAT CGCGGCGCCG GGCGGCCGGA GGCCTGCTAC
CTGTTGGAGC GGCTGATGGA GACCGCGGCG CGGCAGCTCA AGGTCGATCC GGCGGAATTG
CGCCGCAAGA ACTTCATCAC CAGCTTCCCG CACCAGACCC CGGTGATCAT GGCCTATGAC
ATCGGCGATT TCGGCGCCTC GCTCGACGCC GCCTTGAAGG CGATCGATTA TGCCGGCTTC
CCGGCGCGCC GCGAGAAGGC AAAGAGCGAA GGCAAGCTGC GCGGGCTCGG CTTCTCCTGC
TACATCGAGG CCTGCGGCAT CGCGCCGTCA AAGGCGGTGG GCTCGCTCGG CTCCGGCGTC
GGTTTGTGGG AATCCGCCGA GGTGCGGGTC AATCCGGTCG GCACCATCGA GATCCTCACC
GGCTCGCACA GCCACGGCCA GGGCCACGAG ACCACGTTCG CGCAACTGGT CGCCGATCGC
CTTGGCATTC CGATCAGCCA GGTCTCGATC GTCCACGGCG ACACCGACAA GGTGCAGTTC
GGCATGGGCA CCTACGGCTC GCGCTCGGCC GCCGTCGGCA TGTCGGCAAT CTTCAAGGCG
ATGGAGAAGG TCGAGAAGAA GGCCAAGAAG ATCGCCGCGC ATCAGCTGGA AGCCTCGGAA
GACGACATCG TGATCGAGAA CGGCGAGTTT AAGGTCACCG GCACCGACAA GTCGATCGCG
CTGCCGATGG TGGCGCTGGC CGCCTACACC GCGCACAACC TGCCCGACGG CATGGAGCCG
GGCCTCAAGG AAGGCGCGTT CTACGACCCG ACCAACTTCA CCTTCCCGGC CGGCAGCTAC
ATCTGTGAAA TCGAAGTCGA CAAAGGCACC GGCAAGAGCA CTATCATCAA GTTCGTCGCG
GTCGACGATT TCGGCCGGCT AATCAACCCG ATGATCGTCG ATGGCCAAGT CCATGGCGGG
CTGGCGCAGG GCATCGGCCA GGCGATTCTC GAGCAGGCGA TCTATGACGA CACCGGGCAG
TTGATCACCG CGTCGTTCAT GGACTACGCG ATGCCGCGCG CCGACGACGT GCCGAGCTTC
GACATCTCGC ACACCACGAC GCTGTGCCCG GGCAATCCGC TCGGCGTCAA GGGCTGCGGC
GAGGCCGGCG CGATCGGCGC CTCGGCGGCG GTGATCAACG CCATCACCGA CGCGATCGGC
AACAACAAAC TCGACATGCC GGCGACCCCG GACCGGGTCT GGCACGCGAT GCAGGCATCG
CTGCAGCAGG CGGCGGAGTA G
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| Protein sequence | MGVEGIGASV VRKEDRRFIT GRGRYVDDIK VMGMTHAYFV RSPHAHAKVI SIDVEAAKAM
PGVVDVLTGQ QIVDDKVGNL ICGWAVHSKD GSAMKMGAWP AMAPETVRFV GQAVAVVIAE
SRNLARDAAE AVVVHYEELP SAHHIAMAIA PGAPQLHPEA PGNIVYDWSI GEEKAVDEAF
AKAANVVTFE LVNNRLVPNA MEPRAALAEY NEAEEHFTLH TTSQNPHVAR LVLSAFYNIA
PEHKLRVVAP DVGGGFGSKI FIYPEEMVAL WASKKVRRPV KWTGDRNEAF LTDAHGRDHI
SKAEMAFDAD NKILGLRVKT HANFGAYMSL FSSSVPTYLY ATLLSGQYNI PAIYAEVIGV
YTNTTPVDAY RGAGRPEACY LLERLMETAA RQLKVDPAEL RRKNFITSFP HQTPVIMAYD
IGDFGASLDA ALKAIDYAGF PARREKAKSE GKLRGLGFSC YIEACGIAPS KAVGSLGSGV
GLWESAEVRV NPVGTIEILT GSHSHGQGHE TTFAQLVADR LGIPISQVSI VHGDTDKVQF
GMGTYGSRSA AVGMSAIFKA MEKVEKKAKK IAAHQLEASE DDIVIENGEF KVTGTDKSIA
LPMVALAAYT AHNLPDGMEP GLKEGAFYDP TNFTFPAGSY ICEIEVDKGT GKSTIIKFVA
VDDFGRLINP MIVDGQVHGG LAQGIGQAIL EQAIYDDTGQ LITASFMDYA MPRADDVPSF
DISHTTTLCP GNPLGVKGCG EAGAIGASAA VINAITDAIG NNKLDMPATP DRVWHAMQAS
LQQAAE
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